Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CDC42SE2Q9NRR3 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CDC42SE2Q9NRR3 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CDC42SE2Q9NRR3 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CDC42SE2Q9NRR3 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
CDC42SE2Q9NRR3 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CDC42SE2Q9NRR3 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CDC42SE2Q9NRR3 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CDC42SE2Q9NRR3 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
CDC42SE2Q9NRR3 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
CDC42SE2Q9NRR3 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
CDC42SE2Q9NRR3 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CDC42SE2Q9NRR3 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CDC42SE2Q9NRR3 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CDC42SE2Q9NRR3 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC11.87□□□□□ -0.51
CDC42SE2Q9NRR3 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
CDC42SE2Q9NRR3 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC11.87□□□□□ -0.51
CDC42SE2Q9NRR3 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
CDC42SE2Q9NRR3 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CDC42SE2Q9NRR3 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
CDC42SE2Q9NRR3 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CDC42SE2Q9NRR3 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC11.87□□□□□ -0.51
CDC42SE2Q9NRR3 RNF152P1-201ENST00000397754 604 ntBASIC11.87□□□□□ -0.51
CDC42SE2Q9NRR3 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC11.87□□□□□ -0.51
CDC42SE2Q9NRR3 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC11.87□□□□□ -0.51
CDC42SE2Q9NRR3 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CDC42SE2Q9NRR3 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC11.87□□□□□ -0.51
CDC42SE2Q9NRR3 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC11.87□□□□□ -0.51
CDC42SE2Q9NRR3 VENTXP5-201ENST00000523979 775 ntBASIC11.87□□□□□ -0.51
CDC42SE2Q9NRR3 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CDC42SE2Q9NRR3 STK25P1-201ENST00000585406 838 ntBASIC11.87□□□□□ -0.51
CDC42SE2Q9NRR3 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CDC42SE2Q9NRR3 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
CDC42SE2Q9NRR3 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC11.87□□□□□ -0.51
CDC42SE2Q9NRR3 AC092171.3-201ENST00000610122 2651 ntBASIC11.87□□□□□ -0.51
CDC42SE2Q9NRR3 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CDC42SE2Q9NRR3 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
CDC42SE2Q9NRR3 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CDC42SE2Q9NRR3 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC11.87□□□□□ -0.51
CDC42SE2Q9NRR3 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC11.87□□□□□ -0.51
CDC42SE2Q9NRR3 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CDC42SE2Q9NRR3 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
CDC42SE2Q9NRR3 AC006449.5-201ENST00000610658 2098 ntBASIC11.87□□□□□ -0.51
CDC42SE2Q9NRR3 UBC-206ENST00000538617 1303 ntTSL 5 BASIC11.86□□□□□ -0.51
CDC42SE2Q9NRR3 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CDC42SE2Q9NRR3 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CDC42SE2Q9NRR3 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CDC42SE2Q9NRR3 KRT8P10-201ENST00000450021 1447 ntBASIC11.86□□□□□ -0.51
CDC42SE2Q9NRR3 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC11.86□□□□□ -0.51
CDC42SE2Q9NRR3 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC11.86□□□□□ -0.51
CDC42SE2Q9NRR3 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CDC42SE2Q9NRR3 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC11.86□□□□□ -0.51
CDC42SE2Q9NRR3 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CDC42SE2Q9NRR3 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CDC42SE2Q9NRR3 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CDC42SE2Q9NRR3 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CDC42SE2Q9NRR3 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CDC42SE2Q9NRR3 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CDC42SE2Q9NRR3 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC11.86□□□□□ -0.51
CDC42SE2Q9NRR3 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC11.86□□□□□ -0.51
CDC42SE2Q9NRR3 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CDC42SE2Q9NRR3 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CDC42SE2Q9NRR3 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC11.86□□□□□ -0.51
CDC42SE2Q9NRR3 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CDC42SE2Q9NRR3 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CDC42SE2Q9NRR3 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CDC42SE2Q9NRR3 TERF1P1-201ENST00000311003 1181 ntBASIC11.86□□□□□ -0.51
CDC42SE2Q9NRR3 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
CDC42SE2Q9NRR3 FAM220CP-201ENST00000395253 831 ntBASIC11.86□□□□□ -0.51
CDC42SE2Q9NRR3 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
CDC42SE2Q9NRR3 KRT18P38-201ENST00000449496 1282 ntBASIC11.86□□□□□ -0.51
CDC42SE2Q9NRR3 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC11.86□□□□□ -0.51
CDC42SE2Q9NRR3 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC11.86□□□□□ -0.51
CDC42SE2Q9NRR3 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC11.86□□□□□ -0.51
CDC42SE2Q9NRR3 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC11.86□□□□□ -0.51
CDC42SE2Q9NRR3 HYMAI.1-201ENST00000620949 238 ntBASIC11.86□□□□□ -0.51
CDC42SE2Q9NRR3 WDR6-223ENST00000627177 207 ntTSL 2 BASIC11.86□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms