Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
UPF3BQ9BZI7 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC20.56■□□□□ 0.88
UPF3BQ9BZI7 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UPF3BQ9BZI7 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC20.56■□□□□ 0.88
UPF3BQ9BZI7 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UPF3BQ9BZI7 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
UPF3BQ9BZI7 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC20.56■□□□□ 0.88
UPF3BQ9BZI7 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UPF3BQ9BZI7 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UPF3BQ9BZI7 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC20.55■□□□□ 0.88
UPF3BQ9BZI7 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC20.55■□□□□ 0.88
UPF3BQ9BZI7 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC20.55■□□□□ 0.88
UPF3BQ9BZI7 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UPF3BQ9BZI7 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
UPF3BQ9BZI7 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UPF3BQ9BZI7 AC003669.1-201ENST00000334569 611 ntBASIC20.55■□□□□ 0.88
UPF3BQ9BZI7 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC20.55■□□□□ 0.88
UPF3BQ9BZI7 CTNS-203ENST00000399306 803 ntTSL 3 BASIC20.55■□□□□ 0.88
UPF3BQ9BZI7 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
UPF3BQ9BZI7 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC20.55■□□□□ 0.88
UPF3BQ9BZI7 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC20.55■□□□□ 0.88
UPF3BQ9BZI7 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UPF3BQ9BZI7 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
UPF3BQ9BZI7 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
UPF3BQ9BZI7 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC20.55■□□□□ 0.88
UPF3BQ9BZI7 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC20.55■□□□□ 0.88
UPF3BQ9BZI7 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UPF3BQ9BZI7 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC20.55■□□□□ 0.88
UPF3BQ9BZI7 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
UPF3BQ9BZI7 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
UPF3BQ9BZI7 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
UPF3BQ9BZI7 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
UPF3BQ9BZI7 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC20.55■□□□□ 0.88
UPF3BQ9BZI7 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC20.55■□□□□ 0.88
UPF3BQ9BZI7 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
UPF3BQ9BZI7 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UPF3BQ9BZI7 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UPF3BQ9BZI7 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UPF3BQ9BZI7 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UPF3BQ9BZI7 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
UPF3BQ9BZI7 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
UPF3BQ9BZI7 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UPF3BQ9BZI7 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC20.55■□□□□ 0.88
UPF3BQ9BZI7 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
UPF3BQ9BZI7 STX3-203ENST00000529177 1571 ntTSL 2 BASIC20.55■□□□□ 0.88
UPF3BQ9BZI7 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UPF3BQ9BZI7 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.55■□□□□ 0.88
UPF3BQ9BZI7 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC20.55■□□□□ 0.88
UPF3BQ9BZI7 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC20.54■□□□□ 0.88
UPF3BQ9BZI7 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UPF3BQ9BZI7 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC20.54■□□□□ 0.88
UPF3BQ9BZI7 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
UPF3BQ9BZI7 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
UPF3BQ9BZI7 AC078925.2-201ENST00000624013 1973 ntBASIC20.54■□□□□ 0.88
UPF3BQ9BZI7 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
UPF3BQ9BZI7 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
UPF3BQ9BZI7 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
UPF3BQ9BZI7 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
UPF3BQ9BZI7 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
UPF3BQ9BZI7 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.54■□□□□ 0.88
UPF3BQ9BZI7 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC20.54■□□□□ 0.88
UPF3BQ9BZI7 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC20.54■□□□□ 0.88
UPF3BQ9BZI7 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC20.54■□□□□ 0.88
UPF3BQ9BZI7 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.54■□□□□ 0.88
UPF3BQ9BZI7 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.54■□□□□ 0.88
UPF3BQ9BZI7 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
UPF3BQ9BZI7 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.54■□□□□ 0.88
UPF3BQ9BZI7 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.54■□□□□ 0.88
UPF3BQ9BZI7 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.54■□□□□ 0.88
UPF3BQ9BZI7 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC20.54■□□□□ 0.88
UPF3BQ9BZI7 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC20.54■□□□□ 0.88
UPF3BQ9BZI7 AC069148.1-201ENST00000608741 768 ntBASIC20.54■□□□□ 0.88
UPF3BQ9BZI7 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.54■□□□□ 0.88
UPF3BQ9BZI7 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC20.54■□□□□ 0.88
UPF3BQ9BZI7 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
UPF3BQ9BZI7 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UPF3BQ9BZI7 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC20.54■□□□□ 0.88
UPF3BQ9BZI7 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
UPF3BQ9BZI7 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC20.54■□□□□ 0.88
UPF3BQ9BZI7 PMPCAP1-201ENST00000508114 1576 ntBASIC20.54■□□□□ 0.88
UPF3BQ9BZI7 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UPF3BQ9BZI7 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC20.54■□□□□ 0.88
UPF3BQ9BZI7 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UPF3BQ9BZI7 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
UPF3BQ9BZI7 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC20.54■□□□□ 0.88
UPF3BQ9BZI7 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
UPF3BQ9BZI7 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
UPF3BQ9BZI7 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UPF3BQ9BZI7 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
UPF3BQ9BZI7 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UPF3BQ9BZI7 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UPF3BQ9BZI7 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
UPF3BQ9BZI7 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC20.53■□□□□ 0.88
UPF3BQ9BZI7 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UPF3BQ9BZI7 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
UPF3BQ9BZI7 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
UPF3BQ9BZI7 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
UPF3BQ9BZI7 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
UPF3BQ9BZI7 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
UPF3BQ9BZI7 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms