Protein–RNA interactions for Protein: Q9BV90

SNRNP25, U11/U12 small nuclear ribonucleoprotein 25 kDa protein, humanhuman

Known RBP Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25Q9BV90 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SNRNP25Q9BV90 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNRNP25Q9BV90 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SNRNP25Q9BV90 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNRNP25Q9BV90 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNRNP25Q9BV90 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SNRNP25Q9BV90 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
SNRNP25Q9BV90 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNRNP25Q9BV90 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNRNP25Q9BV90 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNRNP25Q9BV90 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNRNP25Q9BV90 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SNRNP25Q9BV90 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.84■□□□□ 0.45
SNRNP25Q9BV90 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.83■□□□□ 0.45
SNRNP25Q9BV90 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.83■□□□□ 0.45
SNRNP25Q9BV90 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SNRNP25Q9BV90 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
SNRNP25Q9BV90 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SNRNP25Q9BV90 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SNRNP25Q9BV90 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SNRNP25Q9BV90 AC105020.1-201ENST00000435356 2205 ntBASIC17.83■□□□□ 0.45
SNRNP25Q9BV90 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SNRNP25Q9BV90 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.83■□□□□ 0.45
SNRNP25Q9BV90 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.83■□□□□ 0.45
SNRNP25Q9BV90 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
SNRNP25Q9BV90 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SNRNP25Q9BV90 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.45
SNRNP25Q9BV90 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SNRNP25Q9BV90 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SNRNP25Q9BV90 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SNRNP25Q9BV90 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SNRNP25Q9BV90 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SNRNP25Q9BV90 EMBP1-201ENST00000458200 901 ntBASIC17.83■□□□□ 0.44
SNRNP25Q9BV90 SCARNA2-201ENST00000458748 420 ntBASIC17.83■□□□□ 0.44
SNRNP25Q9BV90 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.83■□□□□ 0.44
SNRNP25Q9BV90 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.83■□□□□ 0.44
SNRNP25Q9BV90 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.83■□□□□ 0.44
SNRNP25Q9BV90 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.83■□□□□ 0.44
SNRNP25Q9BV90 AC025062.2-201ENST00000605477 670 ntBASIC17.83■□□□□ 0.44
SNRNP25Q9BV90 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.83■□□□□ 0.44
SNRNP25Q9BV90 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.83■□□□□ 0.44
SNRNP25Q9BV90 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
SNRNP25Q9BV90 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.83■□□□□ 0.44
SNRNP25Q9BV90 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
SNRNP25Q9BV90 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SNRNP25Q9BV90 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
SNRNP25Q9BV90 NKILA-202ENST00000614771 2598 ntBASIC17.83■□□□□ 0.44
SNRNP25Q9BV90 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SNRNP25Q9BV90 AC106886.4-201ENST00000623557 2502 ntBASIC17.82■□□□□ 0.44
SNRNP25Q9BV90 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNRNP25Q9BV90 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.82■□□□□ 0.44
SNRNP25Q9BV90 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNRNP25Q9BV90 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNRNP25Q9BV90 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SNRNP25Q9BV90 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SNRNP25Q9BV90 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
SNRNP25Q9BV90 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SNRNP25Q9BV90 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNRNP25Q9BV90 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNRNP25Q9BV90 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SNRNP25Q9BV90 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNRNP25Q9BV90 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNRNP25Q9BV90 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SNRNP25Q9BV90 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SNRNP25Q9BV90 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.82■□□□□ 0.44
SNRNP25Q9BV90 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.82■□□□□ 0.44
SNRNP25Q9BV90 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SNRNP25Q9BV90 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.82■□□□□ 0.44
SNRNP25Q9BV90 AL139424.1-201ENST00000607572 797 ntBASIC17.82■□□□□ 0.44
SNRNP25Q9BV90 AL589182.2-201ENST00000619332 1049 ntBASIC17.82■□□□□ 0.44
SNRNP25Q9BV90 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SNRNP25Q9BV90 TP73-AS1-207ENST00000624167 988 ntBASIC17.82■□□□□ 0.44
SNRNP25Q9BV90 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNRNP25Q9BV90 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.82■□□□□ 0.44
SNRNP25Q9BV90 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SNRNP25Q9BV90 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNRNP25Q9BV90 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNRNP25Q9BV90 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.82■□□□□ 0.44
SNRNP25Q9BV90 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNRNP25Q9BV90 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.82■□□□□ 0.44
SNRNP25Q9BV90 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SNRNP25Q9BV90 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNRNP25Q9BV90 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SNRNP25Q9BV90 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNRNP25Q9BV90 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SNRNP25Q9BV90 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNRNP25Q9BV90 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.82■□□□□ 0.44
SNRNP25Q9BV90 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNRNP25Q9BV90 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SNRNP25Q9BV90 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.81■□□□□ 0.44
SNRNP25Q9BV90 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNRNP25Q9BV90 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SNRNP25Q9BV90 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNRNP25Q9BV90 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNRNP25Q9BV90 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNRNP25Q9BV90 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SNRNP25Q9BV90 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.81■□□□□ 0.44
SNRNP25Q9BV90 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNRNP25Q9BV90 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNRNP25Q9BV90 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms