Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
SLC44A1Q8WWI5 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SLC44A1Q8WWI5 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SLC44A1Q8WWI5 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SLC44A1Q8WWI5 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SLC44A1Q8WWI5 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SLC44A1Q8WWI5 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SLC44A1Q8WWI5 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SLC44A1Q8WWI5 HLA-A-202ENST00000376806 1854 ntBASIC17.27■□□□□ 0.35
SLC44A1Q8WWI5 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
SLC44A1Q8WWI5 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
SLC44A1Q8WWI5 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
SLC44A1Q8WWI5 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLC44A1Q8WWI5 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.26■□□□□ 0.35
SLC44A1Q8WWI5 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC44A1Q8WWI5 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLC44A1Q8WWI5 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLC44A1Q8WWI5 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
SLC44A1Q8WWI5 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC44A1Q8WWI5 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC44A1Q8WWI5 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SLC44A1Q8WWI5 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC44A1Q8WWI5 LINC02199-201ENST00000506655 2702 ntBASIC17.26■□□□□ 0.35
SLC44A1Q8WWI5 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLC44A1Q8WWI5 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLC44A1Q8WWI5 AK4P3-201ENST00000418260 669 ntBASIC17.26■□□□□ 0.35
SLC44A1Q8WWI5 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SLC44A1Q8WWI5 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.26■□□□□ 0.35
SLC44A1Q8WWI5 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.26■□□□□ 0.35
SLC44A1Q8WWI5 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.26■□□□□ 0.35
SLC44A1Q8WWI5 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLC44A1Q8WWI5 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.26■□□□□ 0.35
SLC44A1Q8WWI5 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC44A1Q8WWI5 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.26■□□□□ 0.35
SLC44A1Q8WWI5 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC44A1Q8WWI5 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
SLC44A1Q8WWI5 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC44A1Q8WWI5 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SLC44A1Q8WWI5 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLC44A1Q8WWI5 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC44A1Q8WWI5 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.26■□□□□ 0.35
SLC44A1Q8WWI5 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC44A1Q8WWI5 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC44A1Q8WWI5 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC44A1Q8WWI5 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.26■□□□□ 0.35
SLC44A1Q8WWI5 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC44A1Q8WWI5 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC44A1Q8WWI5 CICP6-201ENST00000457191 2729 ntBASIC17.26■□□□□ 0.35
SLC44A1Q8WWI5 AL662844.4-201ENST00000606367 2838 ntBASIC17.25■□□□□ 0.35
SLC44A1Q8WWI5 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.25■□□□□ 0.35
SLC44A1Q8WWI5 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.25■□□□□ 0.35
SLC44A1Q8WWI5 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.25■□□□□ 0.35
SLC44A1Q8WWI5 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
SLC44A1Q8WWI5 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SLC44A1Q8WWI5 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC44A1Q8WWI5 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.25■□□□□ 0.35
SLC44A1Q8WWI5 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SLC44A1Q8WWI5 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.25■□□□□ 0.35
SLC44A1Q8WWI5 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC44A1Q8WWI5 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SLC44A1Q8WWI5 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.25■□□□□ 0.35
SLC44A1Q8WWI5 AL645728.1-201ENST00000366221 2101 ntBASIC17.25■□□□□ 0.35
SLC44A1Q8WWI5 MIR1224-201ENST00000408193 85 ntBASIC17.25■□□□□ 0.35
SLC44A1Q8WWI5 TSPY22P-201ENST00000427496 604 ntBASIC17.25■□□□□ 0.35
SLC44A1Q8WWI5 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.25■□□□□ 0.35
SLC44A1Q8WWI5 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SLC44A1Q8WWI5 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.25■□□□□ 0.35
SLC44A1Q8WWI5 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.25■□□□□ 0.35
SLC44A1Q8WWI5 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.25■□□□□ 0.35
SLC44A1Q8WWI5 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.25■□□□□ 0.35
SLC44A1Q8WWI5 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.25■□□□□ 0.35
SLC44A1Q8WWI5 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC44A1Q8WWI5 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC44A1Q8WWI5 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC44A1Q8WWI5 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SLC44A1Q8WWI5 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC44A1Q8WWI5 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SLC44A1Q8WWI5 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
SLC44A1Q8WWI5 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.25■□□□□ 0.35
SLC44A1Q8WWI5 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SLC44A1Q8WWI5 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.25■□□□□ 0.35
SLC44A1Q8WWI5 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
SLC44A1Q8WWI5 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC44A1Q8WWI5 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.25■□□□□ 0.35
SLC44A1Q8WWI5 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SLC44A1Q8WWI5 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.24■□□□□ 0.35
SLC44A1Q8WWI5 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC44A1Q8WWI5 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.24■□□□□ 0.35
SLC44A1Q8WWI5 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SLC44A1Q8WWI5 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SLC44A1Q8WWI5 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC44A1Q8WWI5 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC44A1Q8WWI5 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.24■□□□□ 0.35
SLC44A1Q8WWI5 AC132938.5-201ENST00000624980 1813 ntBASIC17.24■□□□□ 0.35
SLC44A1Q8WWI5 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.24■□□□□ 0.35
SLC44A1Q8WWI5 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC44A1Q8WWI5 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC44A1Q8WWI5 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC44A1Q8WWI5 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.24■□□□□ 0.35
SLC44A1Q8WWI5 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms