Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CNIH3Q8TBE1 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.77■□□□□ 0.11
CNIH3Q8TBE1 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.77■□□□□ 0.11
CNIH3Q8TBE1 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC15.76■□□□□ 0.11
CNIH3Q8TBE1 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CNIH3Q8TBE1 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
CNIH3Q8TBE1 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CNIH3Q8TBE1 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CNIH3Q8TBE1 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.76■□□□□ 0.11
CNIH3Q8TBE1 AC005052.1-201ENST00000625181 2492 ntBASIC15.76■□□□□ 0.11
CNIH3Q8TBE1 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.76■□□□□ 0.11
CNIH3Q8TBE1 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.76■□□□□ 0.11
CNIH3Q8TBE1 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.76■□□□□ 0.11
CNIH3Q8TBE1 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.76■□□□□ 0.11
CNIH3Q8TBE1 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CNIH3Q8TBE1 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CNIH3Q8TBE1 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CNIH3Q8TBE1 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
CNIH3Q8TBE1 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CNIH3Q8TBE1 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.76■□□□□ 0.11
CNIH3Q8TBE1 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CNIH3Q8TBE1 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CNIH3Q8TBE1 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CNIH3Q8TBE1 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CNIH3Q8TBE1 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CNIH3Q8TBE1 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
CNIH3Q8TBE1 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC15.76■□□□□ 0.11
CNIH3Q8TBE1 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CNIH3Q8TBE1 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.76■□□□□ 0.11
CNIH3Q8TBE1 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.76■□□□□ 0.11
CNIH3Q8TBE1 AL157888.1-201ENST00000631930 593 ntBASIC15.76■□□□□ 0.11
CNIH3Q8TBE1 AC092865.7-201ENST00000641832 219 ntBASIC15.76■□□□□ 0.11
CNIH3Q8TBE1 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CNIH3Q8TBE1 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CNIH3Q8TBE1 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
CNIH3Q8TBE1 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CNIH3Q8TBE1 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CNIH3Q8TBE1 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CNIH3Q8TBE1 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CNIH3Q8TBE1 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.76■□□□□ 0.11
CNIH3Q8TBE1 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CNIH3Q8TBE1 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.76■□□□□ 0.11
CNIH3Q8TBE1 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CNIH3Q8TBE1 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CNIH3Q8TBE1 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CNIH3Q8TBE1 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CNIH3Q8TBE1 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CNIH3Q8TBE1 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CNIH3Q8TBE1 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CNIH3Q8TBE1 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CNIH3Q8TBE1 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.75■□□□□ 0.11
CNIH3Q8TBE1 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CNIH3Q8TBE1 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CNIH3Q8TBE1 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CNIH3Q8TBE1 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CNIH3Q8TBE1 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CNIH3Q8TBE1 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC15.75■□□□□ 0.11
CNIH3Q8TBE1 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CNIH3Q8TBE1 AC009947.2-201ENST00000444014 672 ntBASIC15.75■□□□□ 0.11
CNIH3Q8TBE1 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC15.75■□□□□ 0.11
CNIH3Q8TBE1 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.75■□□□□ 0.11
CNIH3Q8TBE1 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC15.75■□□□□ 0.11
CNIH3Q8TBE1 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC15.75■□□□□ 0.11
CNIH3Q8TBE1 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC15.75■□□□□ 0.11
CNIH3Q8TBE1 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC15.75■□□□□ 0.11
CNIH3Q8TBE1 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CNIH3Q8TBE1 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CNIH3Q8TBE1 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.75■□□□□ 0.11
CNIH3Q8TBE1 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CNIH3Q8TBE1 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
CNIH3Q8TBE1 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
CNIH3Q8TBE1 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CNIH3Q8TBE1 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC15.75■□□□□ 0.11
CNIH3Q8TBE1 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.75■□□□□ 0.11
CNIH3Q8TBE1 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CNIH3Q8TBE1 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.75■□□□□ 0.11
CNIH3Q8TBE1 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CNIH3Q8TBE1 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.74■□□□□ 0.11
CNIH3Q8TBE1 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CNIH3Q8TBE1 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CNIH3Q8TBE1 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CNIH3Q8TBE1 AC144831.1-201ENST00000573312 2656 ntBASIC15.74■□□□□ 0.11
CNIH3Q8TBE1 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CNIH3Q8TBE1 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC15.74■□□□□ 0.11
CNIH3Q8TBE1 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
CNIH3Q8TBE1 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CNIH3Q8TBE1 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CNIH3Q8TBE1 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.74■□□□□ 0.11
CNIH3Q8TBE1 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.74■□□□□ 0.11
CNIH3Q8TBE1 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CNIH3Q8TBE1 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CNIH3Q8TBE1 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CNIH3Q8TBE1 PRORSD1P-201ENST00000295112 541 ntBASIC15.74■□□□□ 0.11
CNIH3Q8TBE1 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CNIH3Q8TBE1 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CNIH3Q8TBE1 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC15.74■□□□□ 0.11
CNIH3Q8TBE1 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CNIH3Q8TBE1 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CNIH3Q8TBE1 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CNIH3Q8TBE1 AC002558.1-201ENST00000488906 803 ntBASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms