Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC12.91□□□□□ -0.34
NUP35Q8NFH5 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
NUP35Q8NFH5 HLA-A-202ENST00000376806 1854 ntBASIC12.91□□□□□ -0.34
NUP35Q8NFH5 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
NUP35Q8NFH5 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
NUP35Q8NFH5 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NUP35Q8NFH5 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NUP35Q8NFH5 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NUP35Q8NFH5 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC12.91□□□□□ -0.34
NUP35Q8NFH5 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
NUP35Q8NFH5 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC12.91□□□□□ -0.34
NUP35Q8NFH5 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NUP35Q8NFH5 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
NUP35Q8NFH5 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NUP35Q8NFH5 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NUP35Q8NFH5 KRT18P29-201ENST00000397031 1267 ntBASIC12.91□□□□□ -0.34
NUP35Q8NFH5 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC12.91□□□□□ -0.34
NUP35Q8NFH5 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NUP35Q8NFH5 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC12.91□□□□□ -0.34
NUP35Q8NFH5 TK1-204ENST00000590430 683 ntTSL 3 BASIC12.91□□□□□ -0.34
NUP35Q8NFH5 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC12.91□□□□□ -0.34
NUP35Q8NFH5 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC12.91□□□□□ -0.34
NUP35Q8NFH5 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NUP35Q8NFH5 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NUP35Q8NFH5 FES-204ENST00000414248 2327 ntTSL 2 BASIC12.91□□□□□ -0.34
NUP35Q8NFH5 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC12.91□□□□□ -0.34
NUP35Q8NFH5 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NUP35Q8NFH5 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
NUP35Q8NFH5 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NUP35Q8NFH5 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC12.91□□□□□ -0.34
NUP35Q8NFH5 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NUP35Q8NFH5 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NUP35Q8NFH5 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC12.91□□□□□ -0.34
NUP35Q8NFH5 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC12.91□□□□□ -0.34
NUP35Q8NFH5 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC12.91□□□□□ -0.34
NUP35Q8NFH5 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC12.91□□□□□ -0.34
NUP35Q8NFH5 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NUP35Q8NFH5 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC12.91□□□□□ -0.34
NUP35Q8NFH5 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
NUP35Q8NFH5 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
NUP35Q8NFH5 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
NUP35Q8NFH5 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC12.91□□□□□ -0.34
NUP35Q8NFH5 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
NUP35Q8NFH5 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NUP35Q8NFH5 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
NUP35Q8NFH5 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC12.91□□□□□ -0.34
NUP35Q8NFH5 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC12.91□□□□□ -0.34
NUP35Q8NFH5 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NUP35Q8NFH5 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NUP35Q8NFH5 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NUP35Q8NFH5 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NUP35Q8NFH5 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NUP35Q8NFH5 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC12.9□□□□□ -0.34
NUP35Q8NFH5 NORAD-201ENST00000565493 5339 ntBASIC12.9□□□□□ -0.34
NUP35Q8NFH5 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
NUP35Q8NFH5 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC12.9□□□□□ -0.34
NUP35Q8NFH5 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
NUP35Q8NFH5 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NUP35Q8NFH5 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC12.9□□□□□ -0.34
NUP35Q8NFH5 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
NUP35Q8NFH5 ACE-204ENST00000428043 5120 ntTSL 2 BASIC12.9□□□□□ -0.34
NUP35Q8NFH5 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC12.9□□□□□ -0.34
NUP35Q8NFH5 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
NUP35Q8NFH5 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NUP35Q8NFH5 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NUP35Q8NFH5 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NUP35Q8NFH5 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NUP35Q8NFH5 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NUP35Q8NFH5 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
NUP35Q8NFH5 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
NUP35Q8NFH5 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC12.9□□□□□ -0.34
NUP35Q8NFH5 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
NUP35Q8NFH5 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NUP35Q8NFH5 PPP1R14BP3-201ENST00000509033 445 ntBASIC12.9□□□□□ -0.34
NUP35Q8NFH5 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC12.9□□□□□ -0.34
NUP35Q8NFH5 AP003097.1-201ENST00000530657 1135 ntBASIC12.9□□□□□ -0.34
NUP35Q8NFH5 RNF121-214ENST00000533380 870 ntTSL 3 BASIC12.9□□□□□ -0.34
NUP35Q8NFH5 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NUP35Q8NFH5 ETFA-216ENST00000560726 942 ntTSL 3 BASIC12.9□□□□□ -0.34
NUP35Q8NFH5 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC12.9□□□□□ -0.34
NUP35Q8NFH5 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC12.9□□□□□ -0.34
NUP35Q8NFH5 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC12.9□□□□□ -0.34
NUP35Q8NFH5 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC12.9□□□□□ -0.34
NUP35Q8NFH5 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC12.9□□□□□ -0.34
NUP35Q8NFH5 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
NUP35Q8NFH5 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC12.9□□□□□ -0.34
NUP35Q8NFH5 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NUP35Q8NFH5 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
NUP35Q8NFH5 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NUP35Q8NFH5 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC12.9□□□□□ -0.34
NUP35Q8NFH5 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NUP35Q8NFH5 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NUP35Q8NFH5 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC12.9□□□□□ -0.34
NUP35Q8NFH5 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC12.9□□□□□ -0.34
NUP35Q8NFH5 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
NUP35Q8NFH5 MTHFR-217ENST00000641820 1569 ntBASIC12.9□□□□□ -0.35
NUP35Q8NFH5 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NUP35Q8NFH5 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NUP35Q8NFH5 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NUP35Q8NFH5 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms