Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFX6Q8HWS3 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.94■□□□□ 0.46
RFX6Q8HWS3 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RFX6Q8HWS3 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RFX6Q8HWS3 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.94■□□□□ 0.46
RFX6Q8HWS3 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.94■□□□□ 0.46
RFX6Q8HWS3 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
RFX6Q8HWS3 AC099336.1-202ENST00000602961 463 ntBASIC17.94■□□□□ 0.46
RFX6Q8HWS3 AC114341.1-201ENST00000618070 349 ntBASIC17.94■□□□□ 0.46
RFX6Q8HWS3 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
RFX6Q8HWS3 AC093458.2-201ENST00000623150 629 ntBASIC17.94■□□□□ 0.46
RFX6Q8HWS3 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFX6Q8HWS3 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFX6Q8HWS3 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RFX6Q8HWS3 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RFX6Q8HWS3 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.94■□□□□ 0.46
RFX6Q8HWS3 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFX6Q8HWS3 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFX6Q8HWS3 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.94■□□□□ 0.46
RFX6Q8HWS3 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.94■□□□□ 0.46
RFX6Q8HWS3 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFX6Q8HWS3 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFX6Q8HWS3 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RFX6Q8HWS3 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFX6Q8HWS3 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.93■□□□□ 0.46
RFX6Q8HWS3 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.93■□□□□ 0.46
RFX6Q8HWS3 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
RFX6Q8HWS3 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFX6Q8HWS3 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RFX6Q8HWS3 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFX6Q8HWS3 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RFX6Q8HWS3 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
RFX6Q8HWS3 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RFX6Q8HWS3 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFX6Q8HWS3 EGFEM1P-202ENST00000431685 1563 ntBASIC17.93■□□□□ 0.46
RFX6Q8HWS3 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.93■□□□□ 0.46
RFX6Q8HWS3 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.93■□□□□ 0.46
RFX6Q8HWS3 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFX6Q8HWS3 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
RFX6Q8HWS3 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.93■□□□□ 0.46
RFX6Q8HWS3 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.93■□□□□ 0.46
RFX6Q8HWS3 POM121L3P-201ENST00000419331 1163 ntBASIC17.93■□□□□ 0.46
RFX6Q8HWS3 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RFX6Q8HWS3 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.93■□□□□ 0.46
RFX6Q8HWS3 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFX6Q8HWS3 AC012615.1-201ENST00000565797 1299 ntBASIC17.93■□□□□ 0.46
RFX6Q8HWS3 AC092329.2-201ENST00000598402 547 ntBASIC17.93■□□□□ 0.46
RFX6Q8HWS3 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.93■□□□□ 0.46
RFX6Q8HWS3 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFX6Q8HWS3 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
RFX6Q8HWS3 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.93■□□□□ 0.46
RFX6Q8HWS3 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFX6Q8HWS3 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFX6Q8HWS3 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFX6Q8HWS3 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.93■□□□□ 0.46
RFX6Q8HWS3 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RFX6Q8HWS3 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RFX6Q8HWS3 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
RFX6Q8HWS3 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFX6Q8HWS3 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.93■□□□□ 0.46
RFX6Q8HWS3 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
RFX6Q8HWS3 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.92■□□□□ 0.46
RFX6Q8HWS3 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RFX6Q8HWS3 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
RFX6Q8HWS3 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RFX6Q8HWS3 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
RFX6Q8HWS3 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RFX6Q8HWS3 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
RFX6Q8HWS3 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RFX6Q8HWS3 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RFX6Q8HWS3 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.92■□□□□ 0.46
RFX6Q8HWS3 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RFX6Q8HWS3 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RFX6Q8HWS3 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
RFX6Q8HWS3 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RFX6Q8HWS3 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RFX6Q8HWS3 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
RFX6Q8HWS3 NUS1P2-201ENST00000417358 873 ntBASIC17.92■□□□□ 0.46
RFX6Q8HWS3 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.92■□□□□ 0.46
RFX6Q8HWS3 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.92■□□□□ 0.46
RFX6Q8HWS3 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.92■□□□□ 0.46
RFX6Q8HWS3 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.92■□□□□ 0.46
RFX6Q8HWS3 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RFX6Q8HWS3 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.92■□□□□ 0.46
RFX6Q8HWS3 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.92■□□□□ 0.46
RFX6Q8HWS3 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
RFX6Q8HWS3 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RFX6Q8HWS3 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RFX6Q8HWS3 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.92■□□□□ 0.46
RFX6Q8HWS3 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
RFX6Q8HWS3 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RFX6Q8HWS3 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.92■□□□□ 0.46
RFX6Q8HWS3 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RFX6Q8HWS3 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RFX6Q8HWS3 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
RFX6Q8HWS3 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
RFX6Q8HWS3 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFX6Q8HWS3 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RFX6Q8HWS3 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
RFX6Q8HWS3 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms