Protein–RNA interactions for Protein: P54284

CACNB3, Voltage-dependent L-type calcium channel subunit beta-3, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3P54284 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CACNB3P54284 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CACNB3P54284 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC20.27■□□□□ 0.84
CACNB3P54284 KRT18P32-201ENST00000424695 1287 ntBASIC20.27■□□□□ 0.84
CACNB3P54284 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC20.27■□□□□ 0.84
CACNB3P54284 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
CACNB3P54284 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC20.27■□□□□ 0.84
CACNB3P54284 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC20.27■□□□□ 0.84
CACNB3P54284 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CACNB3P54284 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC20.27■□□□□ 0.83
CACNB3P54284 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
CACNB3P54284 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CACNB3P54284 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
CACNB3P54284 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
CACNB3P54284 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC20.27■□□□□ 0.83
CACNB3P54284 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
CACNB3P54284 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CACNB3P54284 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CACNB3P54284 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC20.26■□□□□ 0.83
CACNB3P54284 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC20.26■□□□□ 0.83
CACNB3P54284 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC20.26■□□□□ 0.83
CACNB3P54284 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CACNB3P54284 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CACNB3P54284 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CACNB3P54284 PTMS-202ENST00000389462 773 ntTSL 2 BASIC20.26■□□□□ 0.83
CACNB3P54284 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC20.26■□□□□ 0.83
CACNB3P54284 GPS2P2-201ENST00000430745 888 ntBASIC20.26■□□□□ 0.83
CACNB3P54284 SPCS2P4-201ENST00000436160 681 ntBASIC20.26■□□□□ 0.83
CACNB3P54284 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC20.26■□□□□ 0.83
CACNB3P54284 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC20.26■□□□□ 0.83
CACNB3P54284 RARRES2P8-201ENST00000566335 367 ntBASIC20.26■□□□□ 0.83
CACNB3P54284 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC20.26■□□□□ 0.83
CACNB3P54284 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC20.26■□□□□ 0.83
CACNB3P54284 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC20.26■□□□□ 0.83
CACNB3P54284 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CACNB3P54284 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.26■□□□□ 0.83
CACNB3P54284 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.26■□□□□ 0.83
CACNB3P54284 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CACNB3P54284 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CACNB3P54284 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC20.26■□□□□ 0.83
CACNB3P54284 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.26■□□□□ 0.83
CACNB3P54284 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
CACNB3P54284 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CACNB3P54284 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CACNB3P54284 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CACNB3P54284 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CACNB3P54284 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.25■□□□□ 0.83
CACNB3P54284 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CACNB3P54284 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CACNB3P54284 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CACNB3P54284 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CACNB3P54284 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
CACNB3P54284 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CACNB3P54284 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CACNB3P54284 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC20.25■□□□□ 0.83
CACNB3P54284 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
CACNB3P54284 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CACNB3P54284 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CACNB3P54284 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC20.25■□□□□ 0.83
CACNB3P54284 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC20.25■□□□□ 0.83
CACNB3P54284 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
CACNB3P54284 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CACNB3P54284 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CACNB3P54284 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CACNB3P54284 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC20.25■□□□□ 0.83
CACNB3P54284 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CACNB3P54284 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CACNB3P54284 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CACNB3P54284 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CACNB3P54284 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC20.24■□□□□ 0.83
CACNB3P54284 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CACNB3P54284 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CACNB3P54284 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CACNB3P54284 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC20.24■□□□□ 0.83
CACNB3P54284 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CACNB3P54284 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
CACNB3P54284 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC20.24■□□□□ 0.83
CACNB3P54284 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC20.24■□□□□ 0.83
CACNB3P54284 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC20.24■□□□□ 0.83
CACNB3P54284 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CACNB3P54284 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC20.24■□□□□ 0.83
CACNB3P54284 AC133963.1-201ENST00000504166 1679 ntBASIC20.24■□□□□ 0.83
CACNB3P54284 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC20.24■□□□□ 0.83
CACNB3P54284 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC20.24■□□□□ 0.83
CACNB3P54284 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC20.24■□□□□ 0.83
CACNB3P54284 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC20.24■□□□□ 0.83
CACNB3P54284 RN7SL589P-201ENST00000481268 310 ntBASIC20.24■□□□□ 0.83
CACNB3P54284 AC093214.1-201ENST00000511688 1107 ntBASIC20.24■□□□□ 0.83
CACNB3P54284 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC20.24■□□□□ 0.83
CACNB3P54284 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
CACNB3P54284 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CACNB3P54284 INO80E-210ENST00000567705 880 ntTSL 3 BASIC20.24■□□□□ 0.83
CACNB3P54284 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC20.24■□□□□ 0.83
CACNB3P54284 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CACNB3P54284 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CACNB3P54284 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC20.24■□□□□ 0.83
CACNB3P54284 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC20.24■□□□□ 0.83
CACNB3P54284 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC20.24■□□□□ 0.83
CACNB3P54284 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
CACNB3P54284 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms