Protein–RNA interactions for Protein: P42695

NCAPD3, Condensin-2 complex subunit D3, humanhuman

Predictions only

Length 1,498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3P42695 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
NCAPD3P42695 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC29.9■■■□□ 2.38
NCAPD3P42695 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC29.9■■■□□ 2.38
NCAPD3P42695 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC29.9■■■□□ 2.38
NCAPD3P42695 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
NCAPD3P42695 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC29.9■■■□□ 2.38
NCAPD3P42695 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
NCAPD3P42695 MTND6P24-201ENST00000440466 518 ntBASIC29.9■■■□□ 2.38
NCAPD3P42695 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
NCAPD3P42695 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC29.9■■■□□ 2.38
NCAPD3P42695 MIR6775-201ENST00000617557 69 ntBASIC29.9■■■□□ 2.38
NCAPD3P42695 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC29.9■■■□□ 2.38
NCAPD3P42695 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
NCAPD3P42695 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
NCAPD3P42695 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
NCAPD3P42695 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC29.9■■■□□ 2.38
NCAPD3P42695 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
NCAPD3P42695 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
NCAPD3P42695 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
NCAPD3P42695 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC29.89■■■□□ 2.38
NCAPD3P42695 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC29.89■■■□□ 2.38
NCAPD3P42695 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC29.89■■■□□ 2.38
NCAPD3P42695 ELK1P1-201ENST00000485699 580 ntBASIC29.89■■■□□ 2.38
NCAPD3P42695 MPDU1-223ENST00000582151 728 ntBASIC29.89■■■□□ 2.38
NCAPD3P42695 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
NCAPD3P42695 LINC00304-203ENST00000565008 1864 ntBASIC29.89■■■□□ 2.38
NCAPD3P42695 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC29.89■■■□□ 2.38
NCAPD3P42695 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC29.89■■■□□ 2.38
NCAPD3P42695 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC29.89■■■□□ 2.38
NCAPD3P42695 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
NCAPD3P42695 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC29.89■■■□□ 2.37
NCAPD3P42695 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC29.89■■■□□ 2.37
NCAPD3P42695 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC29.89■■■□□ 2.37
NCAPD3P42695 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
NCAPD3P42695 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC29.88■■■□□ 2.37
NCAPD3P42695 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC29.88■■■□□ 2.37
NCAPD3P42695 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC29.88■■■□□ 2.37
NCAPD3P42695 MPV17-208ENST00000405076 603 ntTSL 5 BASIC29.88■■■□□ 2.37
NCAPD3P42695 HIST1H2BPS3-201ENST00000419683 341 ntBASIC29.88■■■□□ 2.37
NCAPD3P42695 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC29.88■■■□□ 2.37
NCAPD3P42695 KRT18P34-201ENST00000488218 1270 ntBASIC29.88■■■□□ 2.37
NCAPD3P42695 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC29.88■■■□□ 2.37
NCAPD3P42695 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
NCAPD3P42695 FAM8A2P-201ENST00000528813 1142 ntBASIC29.88■■■□□ 2.37
NCAPD3P42695 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC29.88■■■□□ 2.37
NCAPD3P42695 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC29.88■■■□□ 2.37
NCAPD3P42695 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC29.88■■■□□ 2.37
NCAPD3P42695 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC29.88■■■□□ 2.37
NCAPD3P42695 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC29.88■■■□□ 2.37
NCAPD3P42695 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC29.88■■■□□ 2.37
NCAPD3P42695 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
NCAPD3P42695 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
NCAPD3P42695 LYSMD4-203ENST00000378904 2122 ntBASIC29.87■■■□□ 2.37
NCAPD3P42695 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC29.87■■■□□ 2.37
NCAPD3P42695 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC29.87■■■□□ 2.37
NCAPD3P42695 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
NCAPD3P42695 AP001350.2-201ENST00000625104 1094 ntBASIC29.87■■■□□ 2.37
NCAPD3P42695 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
NCAPD3P42695 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
NCAPD3P42695 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
NCAPD3P42695 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
NCAPD3P42695 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC29.87■■■□□ 2.37
NCAPD3P42695 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC29.87■■■□□ 2.37
NCAPD3P42695 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC29.87■■■□□ 2.37
NCAPD3P42695 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
NCAPD3P42695 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC29.87■■■□□ 2.37
NCAPD3P42695 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC29.87■■■□□ 2.37
NCAPD3P42695 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC29.87■■■□□ 2.37
NCAPD3P42695 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC29.87■■■□□ 2.37
NCAPD3P42695 MIR4492-201ENST00000581627 80 ntBASIC29.87■■■□□ 2.37
NCAPD3P42695 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC29.87■■■□□ 2.37
NCAPD3P42695 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC29.87■■■□□ 2.37
NCAPD3P42695 5S_rRNA.22-201ENST00000614916 106 ntBASIC29.87■■■□□ 2.37
NCAPD3P42695 MIR6787-201ENST00000616675 61 ntBASIC29.87■■■□□ 2.37
NCAPD3P42695 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC29.86■■■□□ 2.37
NCAPD3P42695 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC29.86■■■□□ 2.37
NCAPD3P42695 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
NCAPD3P42695 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC29.86■■■□□ 2.37
NCAPD3P42695 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC29.86■■■□□ 2.37
NCAPD3P42695 RN7SL618P-201ENST00000477850 296 ntBASIC29.86■■■□□ 2.37
NCAPD3P42695 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC29.86■■■□□ 2.37
NCAPD3P42695 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC29.86■■■□□ 2.37
NCAPD3P42695 CTBP2P3-201ENST00000585629 1255 ntBASIC29.86■■■□□ 2.37
NCAPD3P42695 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
NCAPD3P42695 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
NCAPD3P42695 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC29.85■■■□□ 2.37
NCAPD3P42695 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC29.85■■■□□ 2.37
NCAPD3P42695 HLA-DQB1-201ENST00000374943 1656 ntBASIC29.85■■■□□ 2.37
NCAPD3P42695 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
NCAPD3P42695 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
NCAPD3P42695 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
NCAPD3P42695 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
NCAPD3P42695 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
NCAPD3P42695 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC29.85■■■□□ 2.37
NCAPD3P42695 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC29.85■■■□□ 2.37
NCAPD3P42695 CYP2A7P1-201ENST00000595391 815 ntBASIC29.85■■■□□ 2.37
NCAPD3P42695 AL109936.8-201ENST00000641772 604 ntBASIC29.85■■■□□ 2.37
NCAPD3P42695 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
NCAPD3P42695 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC29.85■■■□□ 2.37
NCAPD3P42695 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms