Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 AL391256.1-201ENST00000443260 1855 ntBASIC17.32■□□□□ 0.36
LSP1P33241 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LSP1P33241 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.32■□□□□ 0.36
LSP1P33241 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LSP1P33241 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.32■□□□□ 0.36
LSP1P33241 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
LSP1P33241 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LSP1P33241 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LSP1P33241 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
LSP1P33241 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC17.31■□□□□ 0.36
LSP1P33241 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LSP1P33241 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.31■□□□□ 0.36
LSP1P33241 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LSP1P33241 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
LSP1P33241 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LSP1P33241 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
LSP1P33241 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC17.31■□□□□ 0.36
LSP1P33241 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LSP1P33241 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LSP1P33241 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.31■□□□□ 0.36
LSP1P33241 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
LSP1P33241 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LSP1P33241 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LSP1P33241 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.31■□□□□ 0.36
LSP1P33241 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LSP1P33241 KRT18P29-201ENST00000397031 1267 ntBASIC17.31■□□□□ 0.36
LSP1P33241 ESRRAP1-201ENST00000400596 1257 ntBASIC17.31■□□□□ 0.36
LSP1P33241 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LSP1P33241 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
LSP1P33241 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.31■□□□□ 0.36
LSP1P33241 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LSP1P33241 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.31■□□□□ 0.36
LSP1P33241 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.31■□□□□ 0.36
LSP1P33241 WWOX-216ENST00000569818 525 ntBASIC17.31■□□□□ 0.36
LSP1P33241 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.31■□□□□ 0.36
LSP1P33241 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LSP1P33241 CR769767.2-201ENST00000622735 460 ntBASIC17.31■□□□□ 0.36
LSP1P33241 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.31■□□□□ 0.36
LSP1P33241 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LSP1P33241 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LSP1P33241 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LSP1P33241 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LSP1P33241 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
LSP1P33241 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LSP1P33241 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LSP1P33241 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LSP1P33241 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LSP1P33241 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC17.3■□□□□ 0.36
LSP1P33241 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC17.3■□□□□ 0.36
LSP1P33241 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LSP1P33241 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
LSP1P33241 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LSP1P33241 TNRC18P2-201ENST00000417666 2714 ntBASIC17.3■□□□□ 0.36
LSP1P33241 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LSP1P33241 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LSP1P33241 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
LSP1P33241 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LSP1P33241 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LSP1P33241 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LSP1P33241 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.3■□□□□ 0.36
LSP1P33241 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LSP1P33241 KRT18P65-201ENST00000439811 1286 ntBASIC17.3■□□□□ 0.36
LSP1P33241 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.3■□□□□ 0.36
LSP1P33241 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.3■□□□□ 0.36
LSP1P33241 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.3■□□□□ 0.36
LSP1P33241 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
LSP1P33241 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LSP1P33241 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LSP1P33241 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.3■□□□□ 0.36
LSP1P33241 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LSP1P33241 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
LSP1P33241 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.3■□□□□ 0.36
LSP1P33241 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.3■□□□□ 0.36
LSP1P33241 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LSP1P33241 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LSP1P33241 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
LSP1P33241 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LSP1P33241 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LSP1P33241 FSCN1P1-201ENST00000568912 1481 ntBASIC17.3■□□□□ 0.36
LSP1P33241 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LSP1P33241 AC073347.1-201ENST00000421633 2643 ntBASIC17.3■□□□□ 0.36
LSP1P33241 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LSP1P33241 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC17.29■□□□□ 0.36
LSP1P33241 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
LSP1P33241 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.29■□□□□ 0.36
LSP1P33241 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.29■□□□□ 0.36
LSP1P33241 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
LSP1P33241 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LSP1P33241 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
LSP1P33241 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LSP1P33241 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LSP1P33241 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.29■□□□□ 0.36
LSP1P33241 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LSP1P33241 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LSP1P33241 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.29■□□□□ 0.36
LSP1P33241 AC124016.1-201ENST00000609552 612 ntBASIC17.29■□□□□ 0.36
LSP1P33241 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
LSP1P33241 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.29■□□□□ 0.36
LSP1P33241 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LSP1P33241 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms