Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HMGCRP04035 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMGCRP04035 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMGCRP04035 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMGCRP04035 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMGCRP04035 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HMGCRP04035 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HMGCRP04035 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HMGCRP04035 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HMGCRP04035 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
HMGCRP04035 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
HMGCRP04035 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HMGCRP04035 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HMGCRP04035 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC19.31■□□□□ 0.68
HMGCRP04035 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC19.31■□□□□ 0.68
HMGCRP04035 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC19.31■□□□□ 0.68
HMGCRP04035 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.31■□□□□ 0.68
HMGCRP04035 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
HMGCRP04035 MIR6080-201ENST00000617359 66 ntBASIC19.31■□□□□ 0.68
HMGCRP04035 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HMGCRP04035 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.31■□□□□ 0.68
HMGCRP04035 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
HMGCRP04035 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HMGCRP04035 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
HMGCRP04035 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.31■□□□□ 0.68
HMGCRP04035 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HMGCRP04035 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
HMGCRP04035 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC19.3■□□□□ 0.68
HMGCRP04035 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
HMGCRP04035 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.3■□□□□ 0.68
HMGCRP04035 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HMGCRP04035 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.3■□□□□ 0.68
HMGCRP04035 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMGCRP04035 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HMGCRP04035 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC19.3■□□□□ 0.68
HMGCRP04035 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC19.3■□□□□ 0.68
HMGCRP04035 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMGCRP04035 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC19.3■□□□□ 0.68
HMGCRP04035 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMGCRP04035 PPP6R2P1-201ENST00000450880 1275 ntBASIC19.3■□□□□ 0.68
HMGCRP04035 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC19.3■□□□□ 0.68
HMGCRP04035 GATD1-206ENST00000526325 756 ntTSL 5 BASIC19.3■□□□□ 0.68
HMGCRP04035 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC19.3■□□□□ 0.68
HMGCRP04035 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMGCRP04035 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HMGCRP04035 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMGCRP04035 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
HMGCRP04035 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMGCRP04035 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC19.3■□□□□ 0.68
HMGCRP04035 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMGCRP04035 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMGCRP04035 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMGCRP04035 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMGCRP04035 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
HMGCRP04035 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HMGCRP04035 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HMGCRP04035 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMGCRP04035 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.3■□□□□ 0.68
HMGCRP04035 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
HMGCRP04035 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HMGCRP04035 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HMGCRP04035 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
HMGCRP04035 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
HMGCRP04035 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HMGCRP04035 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19.29■□□□□ 0.68
HMGCRP04035 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.29■□□□□ 0.68
HMGCRP04035 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.29■□□□□ 0.68
HMGCRP04035 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HMGCRP04035 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC19.29■□□□□ 0.68
HMGCRP04035 HMGA1P7-201ENST00000406908 502 ntBASIC19.29■□□□□ 0.68
HMGCRP04035 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
HMGCRP04035 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC19.29■□□□□ 0.68
HMGCRP04035 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC19.29■□□□□ 0.68
HMGCRP04035 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC19.29■□□□□ 0.68
HMGCRP04035 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.29■□□□□ 0.68
HMGCRP04035 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HMGCRP04035 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.29■□□□□ 0.68
HMGCRP04035 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.29■□□□□ 0.68
HMGCRP04035 AL009183.1-201ENST00000603760 355 ntBASIC19.29■□□□□ 0.68
HMGCRP04035 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
HMGCRP04035 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HMGCRP04035 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
HMGCRP04035 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HMGCRP04035 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC19.29■□□□□ 0.68
HMGCRP04035 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
HMGCRP04035 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HMGCRP04035 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HMGCRP04035 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.29■□□□□ 0.68
HMGCRP04035 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.29■□□□□ 0.68
HMGCRP04035 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC19.29■□□□□ 0.68
HMGCRP04035 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HMGCRP04035 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
HMGCRP04035 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
HMGCRP04035 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HMGCRP04035 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMGCRP04035 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMGCRP04035 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HMGCRP04035 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.28■□□□□ 0.68
HMGCRP04035 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
HMGCRP04035 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms