Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEF11O60813 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.43■□□□□ 0.38
PRAMEF11O60813 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEF11O60813 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEF11O60813 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.42■□□□□ 0.38
PRAMEF11O60813 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
PRAMEF11O60813 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEF11O60813 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEF11O60813 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.42■□□□□ 0.38
PRAMEF11O60813 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEF11O60813 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.42■□□□□ 0.38
PRAMEF11O60813 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEF11O60813 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.42■□□□□ 0.38
PRAMEF11O60813 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
PRAMEF11O60813 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEF11O60813 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PRAMEF11O60813 AC009947.1-201ENST00000444350 727 ntBASIC17.42■□□□□ 0.38
PRAMEF11O60813 AC108073.2-201ENST00000464002 357 ntBASIC17.42■□□□□ 0.38
PRAMEF11O60813 DUX4L17-201ENST00000557360 1267 ntBASIC17.42■□□□□ 0.38
PRAMEF11O60813 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.42■□□□□ 0.38
PRAMEF11O60813 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEF11O60813 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.42■□□□□ 0.38
PRAMEF11O60813 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEF11O60813 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEF11O60813 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEF11O60813 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
PRAMEF11O60813 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
PRAMEF11O60813 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEF11O60813 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.42■□□□□ 0.38
PRAMEF11O60813 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEF11O60813 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEF11O60813 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEF11O60813 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.42■□□□□ 0.38
PRAMEF11O60813 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEF11O60813 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PRAMEF11O60813 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEF11O60813 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.42■□□□□ 0.38
PRAMEF11O60813 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEF11O60813 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
PRAMEF11O60813 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEF11O60813 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.41■□□□□ 0.38
PRAMEF11O60813 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.41■□□□□ 0.38
PRAMEF11O60813 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEF11O60813 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEF11O60813 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEF11O60813 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
PRAMEF11O60813 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEF11O60813 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEF11O60813 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEF11O60813 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEF11O60813 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.41■□□□□ 0.38
PRAMEF11O60813 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEF11O60813 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEF11O60813 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.41■□□□□ 0.38
PRAMEF11O60813 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.41■□□□□ 0.38
PRAMEF11O60813 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.41■□□□□ 0.38
PRAMEF11O60813 AC087163.2-201ENST00000457299 853 ntBASIC17.41■□□□□ 0.38
PRAMEF11O60813 AC108751.1-201ENST00000490852 363 ntBASIC17.41■□□□□ 0.38
PRAMEF11O60813 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEF11O60813 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.41■□□□□ 0.38
PRAMEF11O60813 AC145285.3-201ENST00000564603 959 ntBASIC17.41■□□□□ 0.38
PRAMEF11O60813 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
PRAMEF11O60813 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
PRAMEF11O60813 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.41■□□□□ 0.38
PRAMEF11O60813 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEF11O60813 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEF11O60813 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEF11O60813 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.41■□□□□ 0.38
PRAMEF11O60813 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.41■□□□□ 0.38
PRAMEF11O60813 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEF11O60813 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEF11O60813 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEF11O60813 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
PRAMEF11O60813 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEF11O60813 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PRAMEF11O60813 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PRAMEF11O60813 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PRAMEF11O60813 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PRAMEF11O60813 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PRAMEF11O60813 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PRAMEF11O60813 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PRAMEF11O60813 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PRAMEF11O60813 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.4■□□□□ 0.38
PRAMEF11O60813 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PRAMEF11O60813 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PRAMEF11O60813 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PRAMEF11O60813 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PRAMEF11O60813 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.4■□□□□ 0.38
PRAMEF11O60813 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.4■□□□□ 0.38
PRAMEF11O60813 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PRAMEF11O60813 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PRAMEF11O60813 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PRAMEF11O60813 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.4■□□□□ 0.38
PRAMEF11O60813 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.4■□□□□ 0.38
PRAMEF11O60813 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
PRAMEF11O60813 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PRAMEF11O60813 Z83851.2-201ENST00000609564 659 ntBASIC17.4■□□□□ 0.38
PRAMEF11O60813 AC120114.3-201ENST00000611923 658 ntBASIC17.4■□□□□ 0.38
PRAMEF11O60813 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PRAMEF11O60813 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms