Protein–RNA interactions for Protein: O60359

CACNG3, Voltage-dependent calcium channel gamma-3 subunit, humanhuman

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNG3O60359 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.69■□□□□ 0.42
CACNG3O60359 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CACNG3O60359 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CACNG3O60359 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CACNG3O60359 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CACNG3O60359 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
CACNG3O60359 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CACNG3O60359 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
CACNG3O60359 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CACNG3O60359 AC096734.2-201ENST00000562054 433 ntBASIC17.69■□□□□ 0.42
CACNG3O60359 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.69■□□□□ 0.42
CACNG3O60359 AC010507.1-201ENST00000633895 436 ntBASIC17.69■□□□□ 0.42
CACNG3O60359 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CACNG3O60359 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CACNG3O60359 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CACNG3O60359 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CACNG3O60359 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CACNG3O60359 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CACNG3O60359 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CACNG3O60359 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CACNG3O60359 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CACNG3O60359 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CACNG3O60359 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.69■□□□□ 0.42
CACNG3O60359 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CACNG3O60359 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CACNG3O60359 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CACNG3O60359 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CACNG3O60359 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CACNG3O60359 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CACNG3O60359 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CACNG3O60359 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CACNG3O60359 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.68■□□□□ 0.42
CACNG3O60359 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CACNG3O60359 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CACNG3O60359 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.68■□□□□ 0.42
CACNG3O60359 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.68■□□□□ 0.42
CACNG3O60359 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CACNG3O60359 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CACNG3O60359 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.68■□□□□ 0.42
CACNG3O60359 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CACNG3O60359 AL513190.1-201ENST00000621254 727 ntBASIC17.68■□□□□ 0.42
CACNG3O60359 AC134684.3-201ENST00000641758 218 ntBASIC17.68■□□□□ 0.42
CACNG3O60359 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CACNG3O60359 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CACNG3O60359 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CACNG3O60359 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CACNG3O60359 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.68■□□□□ 0.42
CACNG3O60359 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CACNG3O60359 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.68■□□□□ 0.42
CACNG3O60359 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.68■□□□□ 0.42
CACNG3O60359 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CACNG3O60359 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CACNG3O60359 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.67■□□□□ 0.42
CACNG3O60359 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CACNG3O60359 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CACNG3O60359 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.67■□□□□ 0.42
CACNG3O60359 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CACNG3O60359 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.67■□□□□ 0.42
CACNG3O60359 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CACNG3O60359 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.67■□□□□ 0.42
CACNG3O60359 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CACNG3O60359 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.67■□□□□ 0.42
CACNG3O60359 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.67■□□□□ 0.42
CACNG3O60359 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.67■□□□□ 0.42
CACNG3O60359 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.67■□□□□ 0.42
CACNG3O60359 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.67■□□□□ 0.42
CACNG3O60359 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CACNG3O60359 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.67■□□□□ 0.42
CACNG3O60359 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.67■□□□□ 0.42
CACNG3O60359 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.67■□□□□ 0.42
CACNG3O60359 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.67■□□□□ 0.42
CACNG3O60359 AP001160.2-201ENST00000596071 487 ntBASIC17.67■□□□□ 0.42
CACNG3O60359 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.67■□□□□ 0.42
CACNG3O60359 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CACNG3O60359 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CACNG3O60359 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
CACNG3O60359 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CACNG3O60359 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CACNG3O60359 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CACNG3O60359 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CACNG3O60359 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CACNG3O60359 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CACNG3O60359 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CACNG3O60359 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.67■□□□□ 0.42
CACNG3O60359 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CACNG3O60359 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CACNG3O60359 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.67■□□□□ 0.42
CACNG3O60359 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.67■□□□□ 0.42
CACNG3O60359 AC093525.9-201ENST00000624961 1746 ntBASIC17.67■□□□□ 0.42
CACNG3O60359 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CACNG3O60359 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CACNG3O60359 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CACNG3O60359 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CACNG3O60359 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CACNG3O60359 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CACNG3O60359 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CACNG3O60359 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CACNG3O60359 AC080080.1-201ENST00000625121 2420 ntBASIC17.66■□□□□ 0.42
CACNG3O60359 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CACNG3O60359 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms