Protein–RNA interactions for Protein: O60293

ZFC3H1, Zinc finger C3H1 domain-containing protein, humanhuman

Known RBP Predictions only

Length 1,989 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFC3H1O60293 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17■□□□□ 0.31
ZFC3H1O60293 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
ZFC3H1O60293 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ZFC3H1O60293 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17■□□□□ 0.31
ZFC3H1O60293 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17■□□□□ 0.31
ZFC3H1O60293 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ZFC3H1O60293 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ZFC3H1O60293 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
ZFC3H1O60293 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
ZFC3H1O60293 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17■□□□□ 0.31
ZFC3H1O60293 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17■□□□□ 0.31
ZFC3H1O60293 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17■□□□□ 0.31
ZFC3H1O60293 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ZFC3H1O60293 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ZFC3H1O60293 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
ZFC3H1O60293 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17■□□□□ 0.31
ZFC3H1O60293 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17■□□□□ 0.31
ZFC3H1O60293 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17■□□□□ 0.31
ZFC3H1O60293 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
ZFC3H1O60293 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ZFC3H1O60293 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17■□□□□ 0.31
ZFC3H1O60293 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17■□□□□ 0.31
ZFC3H1O60293 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17■□□□□ 0.31
ZFC3H1O60293 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZFC3H1O60293 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZFC3H1O60293 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.99■□□□□ 0.31
ZFC3H1O60293 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZFC3H1O60293 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZFC3H1O60293 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ZFC3H1O60293 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ZFC3H1O60293 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.99■□□□□ 0.31
ZFC3H1O60293 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.99■□□□□ 0.31
ZFC3H1O60293 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZFC3H1O60293 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.99■□□□□ 0.31
ZFC3H1O60293 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ZFC3H1O60293 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZFC3H1O60293 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.99■□□□□ 0.31
ZFC3H1O60293 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZFC3H1O60293 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZFC3H1O60293 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
ZFC3H1O60293 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
ZFC3H1O60293 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
ZFC3H1O60293 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.99■□□□□ 0.31
ZFC3H1O60293 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.99■□□□□ 0.31
ZFC3H1O60293 UNC93B6-202ENST00000528242 690 ntBASIC16.99■□□□□ 0.31
ZFC3H1O60293 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.99■□□□□ 0.31
ZFC3H1O60293 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.99■□□□□ 0.31
ZFC3H1O60293 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.99■□□□□ 0.31
ZFC3H1O60293 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.99■□□□□ 0.31
ZFC3H1O60293 PGM5P2-202ENST00000637225 1043 ntBASIC16.99■□□□□ 0.31
ZFC3H1O60293 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZFC3H1O60293 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZFC3H1O60293 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZFC3H1O60293 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZFC3H1O60293 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.99■□□□□ 0.31
ZFC3H1O60293 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.99■□□□□ 0.31
ZFC3H1O60293 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ZFC3H1O60293 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
ZFC3H1O60293 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.99■□□□□ 0.31
ZFC3H1O60293 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
ZFC3H1O60293 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZFC3H1O60293 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
ZFC3H1O60293 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
ZFC3H1O60293 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
ZFC3H1O60293 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
ZFC3H1O60293 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.99■□□□□ 0.31
ZFC3H1O60293 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.99■□□□□ 0.31
ZFC3H1O60293 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.99■□□□□ 0.31
ZFC3H1O60293 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
ZFC3H1O60293 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
ZFC3H1O60293 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
ZFC3H1O60293 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ZFC3H1O60293 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ZFC3H1O60293 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.98■□□□□ 0.31
ZFC3H1O60293 AL591424.1-201ENST00000442569 1213 ntBASIC16.98■□□□□ 0.31
ZFC3H1O60293 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.98■□□□□ 0.31
ZFC3H1O60293 SIGLEC30P-201ENST00000455569 941 ntBASIC16.98■□□□□ 0.31
ZFC3H1O60293 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
ZFC3H1O60293 STK25P1-201ENST00000585406 838 ntBASIC16.98■□□□□ 0.31
ZFC3H1O60293 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ZFC3H1O60293 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ZFC3H1O60293 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.98■□□□□ 0.31
ZFC3H1O60293 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
ZFC3H1O60293 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ZFC3H1O60293 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ZFC3H1O60293 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
ZFC3H1O60293 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
ZFC3H1O60293 AC097637.2-201ENST00000624096 1997 ntBASIC16.98■□□□□ 0.31
ZFC3H1O60293 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
ZFC3H1O60293 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.98■□□□□ 0.31
ZFC3H1O60293 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ZFC3H1O60293 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ZFC3H1O60293 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.98■□□□□ 0.31
ZFC3H1O60293 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ZFC3H1O60293 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
ZFC3H1O60293 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
ZFC3H1O60293 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ZFC3H1O60293 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
ZFC3H1O60293 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
ZFC3H1O60293 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms