Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.47■□□□□ 0.23
PCDH7O60245 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDH7O60245 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.47■□□□□ 0.23
PCDH7O60245 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDH7O60245 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.47■□□□□ 0.23
PCDH7O60245 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDH7O60245 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDH7O60245 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.47■□□□□ 0.23
PCDH7O60245 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
PCDH7O60245 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDH7O60245 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.47■□□□□ 0.23
PCDH7O60245 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDH7O60245 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDH7O60245 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDH7O60245 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.47■□□□□ 0.23
PCDH7O60245 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDH7O60245 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDH7O60245 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDH7O60245 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDH7O60245 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDH7O60245 AC148477.5-201ENST00000625164 1645 ntBASIC16.46■□□□□ 0.23
PCDH7O60245 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDH7O60245 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDH7O60245 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDH7O60245 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.46■□□□□ 0.23
PCDH7O60245 AL020989.1-201ENST00000422979 469 ntBASIC16.46■□□□□ 0.23
PCDH7O60245 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.46■□□□□ 0.23
PCDH7O60245 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDH7O60245 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
PCDH7O60245 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDH7O60245 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.46■□□□□ 0.23
PCDH7O60245 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDH7O60245 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.46■□□□□ 0.23
PCDH7O60245 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.46■□□□□ 0.23
PCDH7O60245 AC124947.2-201ENST00000547118 1133 ntBASIC16.46■□□□□ 0.23
PCDH7O60245 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.46■□□□□ 0.23
PCDH7O60245 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.46■□□□□ 0.23
PCDH7O60245 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.46■□□□□ 0.23
PCDH7O60245 AC138894.3-201ENST00000603787 634 ntBASIC16.46■□□□□ 0.23
PCDH7O60245 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.46■□□□□ 0.23
PCDH7O60245 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.46■□□□□ 0.23
PCDH7O60245 AP000867.4-201ENST00000641616 219 ntBASIC16.46■□□□□ 0.23
PCDH7O60245 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
PCDH7O60245 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDH7O60245 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDH7O60245 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.46■□□□□ 0.23
PCDH7O60245 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDH7O60245 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDH7O60245 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.46■□□□□ 0.23
PCDH7O60245 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
PCDH7O60245 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDH7O60245 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH7O60245 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH7O60245 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
PCDH7O60245 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
PCDH7O60245 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH7O60245 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.45■□□□□ 0.22
PCDH7O60245 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
PCDH7O60245 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
PCDH7O60245 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
PCDH7O60245 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
PCDH7O60245 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH7O60245 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH7O60245 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.45■□□□□ 0.22
PCDH7O60245 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH7O60245 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
PCDH7O60245 AC105020.1-201ENST00000435356 2205 ntBASIC16.45■□□□□ 0.22
PCDH7O60245 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH7O60245 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.45■□□□□ 0.22
PCDH7O60245 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH7O60245 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH7O60245 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH7O60245 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH7O60245 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDH7O60245 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH7O60245 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH7O60245 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH7O60245 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
PCDH7O60245 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH7O60245 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH7O60245 SPDYE21P-201ENST00000413323 827 ntBASIC16.45■□□□□ 0.22
PCDH7O60245 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.45■□□□□ 0.22
PCDH7O60245 SIGLEC30P-201ENST00000455569 941 ntBASIC16.45■□□□□ 0.22
PCDH7O60245 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.45■□□□□ 0.22
PCDH7O60245 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PCDH7O60245 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.45■□□□□ 0.22
PCDH7O60245 MIR5100-201ENST00000579544 119 ntBASIC16.45■□□□□ 0.22
PCDH7O60245 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.45■□□□□ 0.22
PCDH7O60245 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH7O60245 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
PCDH7O60245 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
PCDH7O60245 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.45■□□□□ 0.22
PCDH7O60245 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH7O60245 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH7O60245 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDH7O60245 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDH7O60245 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PCDH7O60245 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
PCDH7O60245 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDH7O60245 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms