Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC28.8■■■□□ 2.2
DDX49Q9Y6V7 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
DDX49Q9Y6V7 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
DDX49Q9Y6V7 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC28.79■■■□□ 2.2
DDX49Q9Y6V7 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC28.79■■■□□ 2.2
DDX49Q9Y6V7 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
DDX49Q9Y6V7 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
DDX49Q9Y6V7 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
DDX49Q9Y6V7 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC28.77■■■□□ 2.2
DDX49Q9Y6V7 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
DDX49Q9Y6V7 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC28.77■■■□□ 2.2
DDX49Q9Y6V7 AC092296.2-201ENST00000589470 999 ntBASIC28.77■■■□□ 2.2
DDX49Q9Y6V7 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
DDX49Q9Y6V7 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
DDX49Q9Y6V7 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
DDX49Q9Y6V7 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
DDX49Q9Y6V7 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
DDX49Q9Y6V7 HES4-202ENST00000428771 1040 ntTSL 2 BASIC28.76■■■□□ 2.19
DDX49Q9Y6V7 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
DDX49Q9Y6V7 SNAI3-AS1-204ENST00000567997 2048 ntBASIC28.76■■■□□ 2.19
DDX49Q9Y6V7 HYI-213ENST00000583037 1322 ntTSL 5 BASIC28.75■■■□□ 2.19
DDX49Q9Y6V7 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
DDX49Q9Y6V7 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC28.75■■■□□ 2.19
DDX49Q9Y6V7 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
DDX49Q9Y6V7 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC28.74■■■□□ 2.19
DDX49Q9Y6V7 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC28.74■■■□□ 2.19
DDX49Q9Y6V7 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC28.74■■■□□ 2.19
DDX49Q9Y6V7 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC28.74■■■□□ 2.19
DDX49Q9Y6V7 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
DDX49Q9Y6V7 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
DDX49Q9Y6V7 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
DDX49Q9Y6V7 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC28.73■■■□□ 2.19
DDX49Q9Y6V7 MOB2-207ENST00000614710 705 ntTSL 5 BASIC28.73■■■□□ 2.19
DDX49Q9Y6V7 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC28.72■■■□□ 2.19
DDX49Q9Y6V7 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC28.72■■■□□ 2.19
DDX49Q9Y6V7 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC28.72■■■□□ 2.19
DDX49Q9Y6V7 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC28.71■■■□□ 2.19
DDX49Q9Y6V7 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC28.71■■■□□ 2.19
DDX49Q9Y6V7 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC28.71■■■□□ 2.19
DDX49Q9Y6V7 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC28.71■■■□□ 2.19
DDX49Q9Y6V7 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC28.7■■■□□ 2.19
DDX49Q9Y6V7 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC28.7■■■□□ 2.19
DDX49Q9Y6V7 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
DDX49Q9Y6V7 AL157400.5-201ENST00000507624 621 ntBASIC28.7■■■□□ 2.18
DDX49Q9Y6V7 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
DDX49Q9Y6V7 AC012354.3-201ENST00000623734 483 ntBASIC28.7■■■□□ 2.18
DDX49Q9Y6V7 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
DDX49Q9Y6V7 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC28.69■■■□□ 2.18
DDX49Q9Y6V7 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC28.69■■■□□ 2.18
DDX49Q9Y6V7 AL033527.3-201ENST00000566366 1196 ntBASIC28.69■■■□□ 2.18
DDX49Q9Y6V7 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
DDX49Q9Y6V7 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
DDX49Q9Y6V7 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC28.68■■■□□ 2.18
DDX49Q9Y6V7 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC28.68■■■□□ 2.18
DDX49Q9Y6V7 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
DDX49Q9Y6V7 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC28.68■■■□□ 2.18
DDX49Q9Y6V7 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
DDX49Q9Y6V7 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
DDX49Q9Y6V7 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC28.68■■■□□ 2.18
DDX49Q9Y6V7 CEBPA-AS1-201ENST00000592982 2198 ntBASIC28.68■■■□□ 2.18
DDX49Q9Y6V7 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
DDX49Q9Y6V7 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC28.68■■■□□ 2.18
DDX49Q9Y6V7 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
DDX49Q9Y6V7 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
DDX49Q9Y6V7 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
DDX49Q9Y6V7 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
DDX49Q9Y6V7 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC28.66■■■□□ 2.18
DDX49Q9Y6V7 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
DDX49Q9Y6V7 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
DDX49Q9Y6V7 AP004609.3-201ENST00000610705 1884 ntBASIC28.66■■■□□ 2.18
DDX49Q9Y6V7 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC28.66■■■□□ 2.18
DDX49Q9Y6V7 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC28.65■■■□□ 2.18
DDX49Q9Y6V7 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
DDX49Q9Y6V7 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC28.65■■■□□ 2.18
DDX49Q9Y6V7 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC28.64■■■□□ 2.18
DDX49Q9Y6V7 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC28.64■■■□□ 2.18
DDX49Q9Y6V7 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC28.64■■■□□ 2.18
DDX49Q9Y6V7 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC28.64■■■□□ 2.18
DDX49Q9Y6V7 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC28.64■■■□□ 2.17
DDX49Q9Y6V7 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
DDX49Q9Y6V7 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
DDX49Q9Y6V7 KRT18P60-201ENST00000312876 1297 ntBASIC28.63■■■□□ 2.17
DDX49Q9Y6V7 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
DDX49Q9Y6V7 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC28.63■■■□□ 2.17
DDX49Q9Y6V7 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC28.63■■■□□ 2.17
DDX49Q9Y6V7 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
DDX49Q9Y6V7 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
DDX49Q9Y6V7 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC28.62■■■□□ 2.17
DDX49Q9Y6V7 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC28.62■■■□□ 2.17
DDX49Q9Y6V7 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC28.62■■■□□ 2.17
DDX49Q9Y6V7 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
DDX49Q9Y6V7 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC28.62■■■□□ 2.17
DDX49Q9Y6V7 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
DDX49Q9Y6V7 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC28.61■■■□□ 2.17
DDX49Q9Y6V7 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
DDX49Q9Y6V7 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
DDX49Q9Y6V7 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC28.6■■■□□ 2.17
DDX49Q9Y6V7 ECEL1P2-201ENST00000461596 1295 ntBASIC28.6■■■□□ 2.17
DDX49Q9Y6V7 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC28.6■■■□□ 2.17
DDX49Q9Y6V7 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms