Protein–RNA interactions for Protein: Q9Y5H1

PCDHGA2, Protocadherin gamma-A2, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA2Q9Y5H1 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
PCDHGA2Q9Y5H1 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHGA2Q9Y5H1 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHGA2Q9Y5H1 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
PCDHGA2Q9Y5H1 KRT16P3-201ENST00000439127 1283 ntBASIC24.63■■□□□ 1.53
PCDHGA2Q9Y5H1 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHGA2Q9Y5H1 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHGA2Q9Y5H1 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHGA2Q9Y5H1 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHGA2Q9Y5H1 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
PCDHGA2Q9Y5H1 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
PCDHGA2Q9Y5H1 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC24.62■■□□□ 1.53
PCDHGA2Q9Y5H1 RALB-208ENST00000631312 311 ntTSL 5 BASIC24.62■■□□□ 1.53
PCDHGA2Q9Y5H1 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHGA2Q9Y5H1 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHGA2Q9Y5H1 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHGA2Q9Y5H1 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHGA2Q9Y5H1 UNC93B8-201ENST00000511903 705 ntBASIC24.61■■□□□ 1.53
PCDHGA2Q9Y5H1 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHGA2Q9Y5H1 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC24.61■■□□□ 1.53
PCDHGA2Q9Y5H1 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC24.6■■□□□ 1.53
PCDHGA2Q9Y5H1 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHGA2Q9Y5H1 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
PCDHGA2Q9Y5H1 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC24.59■■□□□ 1.53
PCDHGA2Q9Y5H1 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC24.59■■□□□ 1.53
PCDHGA2Q9Y5H1 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHGA2Q9Y5H1 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHGA2Q9Y5H1 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC24.58■■□□□ 1.53
PCDHGA2Q9Y5H1 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC24.58■■□□□ 1.53
PCDHGA2Q9Y5H1 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC24.58■■□□□ 1.53
PCDHGA2Q9Y5H1 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC24.58■■□□□ 1.53
PCDHGA2Q9Y5H1 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDHGA2Q9Y5H1 AL359504.2-201ENST00000605506 1601 ntBASIC24.57■■□□□ 1.52
PCDHGA2Q9Y5H1 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDHGA2Q9Y5H1 RPS2P7-201ENST00000447334 885 ntBASIC24.57■■□□□ 1.52
PCDHGA2Q9Y5H1 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC24.57■■□□□ 1.52
PCDHGA2Q9Y5H1 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC24.57■■□□□ 1.52
PCDHGA2Q9Y5H1 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
PCDHGA2Q9Y5H1 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDHGA2Q9Y5H1 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC24.56■■□□□ 1.52
PCDHGA2Q9Y5H1 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
PCDHGA2Q9Y5H1 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC24.56■■□□□ 1.52
PCDHGA2Q9Y5H1 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC24.56■■□□□ 1.52
PCDHGA2Q9Y5H1 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
PCDHGA2Q9Y5H1 NALT1-201ENST00000429224 738 ntTSL 5 BASIC24.56■■□□□ 1.52
PCDHGA2Q9Y5H1 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC24.56■■□□□ 1.52
PCDHGA2Q9Y5H1 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
PCDHGA2Q9Y5H1 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
PCDHGA2Q9Y5H1 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PCDHGA2Q9Y5H1 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
PCDHGA2Q9Y5H1 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
PCDHGA2Q9Y5H1 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC24.54■■□□□ 1.52
PCDHGA2Q9Y5H1 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
PCDHGA2Q9Y5H1 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDHGA2Q9Y5H1 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC24.54■■□□□ 1.52
PCDHGA2Q9Y5H1 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDHGA2Q9Y5H1 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
PCDHGA2Q9Y5H1 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC24.53■■□□□ 1.52
PCDHGA2Q9Y5H1 AC022616.5-201ENST00000518796 181 ntBASIC24.53■■□□□ 1.52
PCDHGA2Q9Y5H1 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC24.53■■□□□ 1.52
PCDHGA2Q9Y5H1 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC24.53■■□□□ 1.52
PCDHGA2Q9Y5H1 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC24.52■■□□□ 1.52
PCDHGA2Q9Y5H1 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PCDHGA2Q9Y5H1 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PCDHGA2Q9Y5H1 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC24.51■■□□□ 1.51
PCDHGA2Q9Y5H1 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PCDHGA2Q9Y5H1 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PCDHGA2Q9Y5H1 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
PCDHGA2Q9Y5H1 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PCDHGA2Q9Y5H1 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
PCDHGA2Q9Y5H1 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PCDHGA2Q9Y5H1 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC24.5■■□□□ 1.51
PCDHGA2Q9Y5H1 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHGA2Q9Y5H1 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC24.5■■□□□ 1.51
PCDHGA2Q9Y5H1 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC24.5■■□□□ 1.51
PCDHGA2Q9Y5H1 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC24.5■■□□□ 1.51
PCDHGA2Q9Y5H1 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC24.5■■□□□ 1.51
PCDHGA2Q9Y5H1 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
PCDHGA2Q9Y5H1 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHGA2Q9Y5H1 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PCDHGA2Q9Y5H1 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC24.49■■□□□ 1.51
PCDHGA2Q9Y5H1 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC24.49■■□□□ 1.51
PCDHGA2Q9Y5H1 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PCDHGA2Q9Y5H1 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC24.49■■□□□ 1.51
PCDHGA2Q9Y5H1 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC24.49■■□□□ 1.51
PCDHGA2Q9Y5H1 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PCDHGA2Q9Y5H1 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
PCDHGA2Q9Y5H1 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PCDHGA2Q9Y5H1 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC24.48■■□□□ 1.51
PCDHGA2Q9Y5H1 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
PCDHGA2Q9Y5H1 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PCDHGA2Q9Y5H1 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDHGA2Q9Y5H1 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDHGA2Q9Y5H1 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDHGA2Q9Y5H1 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC24.47■■□□□ 1.51
PCDHGA2Q9Y5H1 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC24.47■■□□□ 1.51
PCDHGA2Q9Y5H1 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC24.46■■□□□ 1.51
PCDHGA2Q9Y5H1 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHGA2Q9Y5H1 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHGA2Q9Y5H1 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms