Protein–RNA interactions for Protein: Q9UKX7

NUP50, Nuclear pore complex protein Nup50, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50Q9UKX7 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NUP50Q9UKX7 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NUP50Q9UKX7 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NUP50Q9UKX7 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NUP50Q9UKX7 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NUP50Q9UKX7 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
NUP50Q9UKX7 AC110285.7-201ENST00000624417 1536 ntBASIC20.83■□□□□ 0.93
NUP50Q9UKX7 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
NUP50Q9UKX7 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NUP50Q9UKX7 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NUP50Q9UKX7 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.83■□□□□ 0.93
NUP50Q9UKX7 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.83■□□□□ 0.93
NUP50Q9UKX7 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NUP50Q9UKX7 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NUP50Q9UKX7 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NUP50Q9UKX7 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
NUP50Q9UKX7 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NUP50Q9UKX7 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.83■□□□□ 0.92
NUP50Q9UKX7 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
NUP50Q9UKX7 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NUP50Q9UKX7 AC022413.1-201ENST00000624602 984 ntBASIC20.82■□□□□ 0.92
NUP50Q9UKX7 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NUP50Q9UKX7 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NUP50Q9UKX7 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.81■□□□□ 0.92
NUP50Q9UKX7 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
NUP50Q9UKX7 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.81■□□□□ 0.92
NUP50Q9UKX7 ABHD17AP5-201ENST00000580133 923 ntBASIC20.81■□□□□ 0.92
NUP50Q9UKX7 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NUP50Q9UKX7 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
NUP50Q9UKX7 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NUP50Q9UKX7 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NUP50Q9UKX7 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NUP50Q9UKX7 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
NUP50Q9UKX7 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.8■□□□□ 0.92
NUP50Q9UKX7 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NUP50Q9UKX7 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NUP50Q9UKX7 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
NUP50Q9UKX7 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC20.79■□□□□ 0.92
NUP50Q9UKX7 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NUP50Q9UKX7 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.79■□□□□ 0.92
NUP50Q9UKX7 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.79■□□□□ 0.92
NUP50Q9UKX7 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NUP50Q9UKX7 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
NUP50Q9UKX7 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
NUP50Q9UKX7 BX255925.1-201ENST00000566954 1854 ntBASIC20.79■□□□□ 0.92
NUP50Q9UKX7 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.79■□□□□ 0.92
NUP50Q9UKX7 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NUP50Q9UKX7 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
NUP50Q9UKX7 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NUP50Q9UKX7 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NUP50Q9UKX7 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.78■□□□□ 0.92
NUP50Q9UKX7 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NUP50Q9UKX7 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NUP50Q9UKX7 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NUP50Q9UKX7 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
NUP50Q9UKX7 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
NUP50Q9UKX7 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NUP50Q9UKX7 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NUP50Q9UKX7 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NUP50Q9UKX7 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NUP50Q9UKX7 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NUP50Q9UKX7 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
NUP50Q9UKX7 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
NUP50Q9UKX7 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
NUP50Q9UKX7 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
NUP50Q9UKX7 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.76■□□□□ 0.91
NUP50Q9UKX7 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NUP50Q9UKX7 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.76■□□□□ 0.91
NUP50Q9UKX7 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NUP50Q9UKX7 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
NUP50Q9UKX7 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NUP50Q9UKX7 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NUP50Q9UKX7 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NUP50Q9UKX7 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.75■□□□□ 0.91
NUP50Q9UKX7 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NUP50Q9UKX7 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
NUP50Q9UKX7 AC148477.6-201ENST00000623746 465 ntBASIC20.75■□□□□ 0.91
NUP50Q9UKX7 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
NUP50Q9UKX7 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
NUP50Q9UKX7 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC20.75■□□□□ 0.91
NUP50Q9UKX7 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NUP50Q9UKX7 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NUP50Q9UKX7 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.74■□□□□ 0.91
NUP50Q9UKX7 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NUP50Q9UKX7 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.74■□□□□ 0.91
NUP50Q9UKX7 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC20.73■□□□□ 0.91
NUP50Q9UKX7 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
NUP50Q9UKX7 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.73■□□□□ 0.91
NUP50Q9UKX7 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NUP50Q9UKX7 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
NUP50Q9UKX7 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
NUP50Q9UKX7 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
NUP50Q9UKX7 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.72■□□□□ 0.91
NUP50Q9UKX7 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
NUP50Q9UKX7 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.72■□□□□ 0.91
NUP50Q9UKX7 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NUP50Q9UKX7 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NUP50Q9UKX7 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NUP50Q9UKX7 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NUP50Q9UKX7 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms