Protein–RNA interactions for Protein: Q9H3S7

PTPN23, Tyrosine-protein phosphatase non-receptor type 23, humanhuman

Predictions only

Length 1,636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23Q9H3S7 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC37.08■■■■□ 3.53
PTPN23Q9H3S7 AC074183.2-201ENST00000623112 922 ntBASIC37.08■■■■□ 3.53
PTPN23Q9H3S7 AC103834.1-201ENST00000520383 144 ntBASIC37.07■■■■□ 3.53
PTPN23Q9H3S7 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC37.07■■■■□ 3.52
PTPN23Q9H3S7 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC37.07■■■■□ 3.52
PTPN23Q9H3S7 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC37.07■■■■□ 3.52
PTPN23Q9H3S7 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC37.06■■■■□ 3.52
PTPN23Q9H3S7 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC37.06■■■■□ 3.52
PTPN23Q9H3S7 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC37.05■■■■□ 3.52
PTPN23Q9H3S7 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC37.04■■■■□ 3.52
PTPN23Q9H3S7 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC37.04■■■■□ 3.52
PTPN23Q9H3S7 AC087393.1-201ENST00000582896 145 ntBASIC37.03■■■■□ 3.52
PTPN23Q9H3S7 BHLHE23-202ENST00000612929 1109 ntBASIC37.03■■■■□ 3.52
PTPN23Q9H3S7 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC37.03■■■■□ 3.52
PTPN23Q9H3S7 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC37.03■■■■□ 3.52
PTPN23Q9H3S7 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC37.02■■■■□ 3.52
PTPN23Q9H3S7 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC37.02■■■■□ 3.52
PTPN23Q9H3S7 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC37.02■■■■□ 3.52
PTPN23Q9H3S7 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC37.01■■■■□ 3.52
PTPN23Q9H3S7 AP004609.3-201ENST00000610705 1884 ntBASIC37.01■■■■□ 3.52
PTPN23Q9H3S7 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC37.01■■■■□ 3.52
PTPN23Q9H3S7 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC37.01■■■■□ 3.52
PTPN23Q9H3S7 IDNK-201ENST00000376417 511 ntTSL 5 BASIC37.01■■■■□ 3.52
PTPN23Q9H3S7 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC37.01■■■■□ 3.52
PTPN23Q9H3S7 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC37.01■■■■□ 3.51
PTPN23Q9H3S7 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC37.01■■■■□ 3.51
PTPN23Q9H3S7 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC37.01■■■■□ 3.51
PTPN23Q9H3S7 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC37.01■■■■□ 3.51
PTPN23Q9H3S7 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC37■■■■□ 3.51
PTPN23Q9H3S7 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC37■■■■□ 3.51
PTPN23Q9H3S7 AL035685.1-201ENST00000636663 812 ntBASIC36.99■■■■□ 3.51
PTPN23Q9H3S7 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC36.99■■■■□ 3.51
PTPN23Q9H3S7 RPS2P7-201ENST00000447334 885 ntBASIC36.99■■■■□ 3.51
PTPN23Q9H3S7 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC36.99■■■■□ 3.51
PTPN23Q9H3S7 AC103724.3-201ENST00000564481 992 ntBASIC36.99■■■■□ 3.51
PTPN23Q9H3S7 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC36.97■■■■□ 3.51
PTPN23Q9H3S7 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC36.97■■■■□ 3.51
PTPN23Q9H3S7 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC36.97■■■■□ 3.51
PTPN23Q9H3S7 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC36.96■■■■□ 3.51
PTPN23Q9H3S7 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC36.96■■■■□ 3.51
PTPN23Q9H3S7 AC009299.2-201ENST00000482477 511 ntBASIC36.96■■■■□ 3.51
PTPN23Q9H3S7 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC36.96■■■■□ 3.51
PTPN23Q9H3S7 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC36.95■■■■□ 3.51
PTPN23Q9H3S7 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC36.95■■■■□ 3.51
PTPN23Q9H3S7 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC36.95■■■■□ 3.51
PTPN23Q9H3S7 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC36.95■■■■□ 3.5
PTPN23Q9H3S7 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC36.94■■■■□ 3.5
PTPN23Q9H3S7 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC36.94■■■■□ 3.5
PTPN23Q9H3S7 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC36.94■■■■□ 3.5
PTPN23Q9H3S7 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC36.94■■■■□ 3.5
PTPN23Q9H3S7 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC36.93■■■■□ 3.5
PTPN23Q9H3S7 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC36.92■■■■□ 3.5
PTPN23Q9H3S7 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC36.92■■■■□ 3.5
PTPN23Q9H3S7 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC36.92■■■■□ 3.5
PTPN23Q9H3S7 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC36.92■■■■□ 3.5
PTPN23Q9H3S7 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC36.91■■■■□ 3.5
PTPN23Q9H3S7 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC36.91■■■■□ 3.5
PTPN23Q9H3S7 MTX2-204ENST00000443241 799 ntTSL 3 BASIC36.91■■■■□ 3.5
PTPN23Q9H3S7 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC36.91■■■■□ 3.5
PTPN23Q9H3S7 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC36.91■■■■□ 3.5
PTPN23Q9H3S7 TRIR-205ENST00000592273 783 ntTSL 3 BASIC36.91■■■■□ 3.5
PTPN23Q9H3S7 AC019171.1-201ENST00000601251 1056 ntBASIC36.91■■■■□ 3.5
PTPN23Q9H3S7 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC36.9■■■■□ 3.5
PTPN23Q9H3S7 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC36.9■■■■□ 3.5
PTPN23Q9H3S7 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC36.89■■■■□ 3.5
PTPN23Q9H3S7 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC36.89■■■■□ 3.5
PTPN23Q9H3S7 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC36.89■■■■□ 3.5
PTPN23Q9H3S7 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC36.89■■■■□ 3.5
PTPN23Q9H3S7 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC36.88■■■■□ 3.5
PTPN23Q9H3S7 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC36.88■■■■□ 3.49
PTPN23Q9H3S7 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC36.87■■■■□ 3.49
PTPN23Q9H3S7 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC36.87■■■■□ 3.49
PTPN23Q9H3S7 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC36.87■■■■□ 3.49
PTPN23Q9H3S7 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC36.87■■■■□ 3.49
PTPN23Q9H3S7 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC36.85■■■■□ 3.49
PTPN23Q9H3S7 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC36.85■■■■□ 3.49
PTPN23Q9H3S7 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC36.85■■■■□ 3.49
PTPN23Q9H3S7 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC36.85■■■■□ 3.49
PTPN23Q9H3S7 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC36.85■■■■□ 3.49
PTPN23Q9H3S7 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC36.85■■■■□ 3.49
PTPN23Q9H3S7 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC36.85■■■■□ 3.49
PTPN23Q9H3S7 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC36.84■■■■□ 3.49
PTPN23Q9H3S7 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC36.84■■■■□ 3.49
PTPN23Q9H3S7 YBX1P4-201ENST00000392794 808 ntBASIC36.84■■■■□ 3.49
PTPN23Q9H3S7 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC36.84■■■■□ 3.49
PTPN23Q9H3S7 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC36.83■■■■□ 3.49
PTPN23Q9H3S7 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC36.83■■■■□ 3.49
PTPN23Q9H3S7 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC36.83■■■■□ 3.49
PTPN23Q9H3S7 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC36.83■■■■□ 3.49
PTPN23Q9H3S7 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC36.82■■■■□ 3.48
PTPN23Q9H3S7 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC36.82■■■■□ 3.48
PTPN23Q9H3S7 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC36.81■■■■□ 3.48
PTPN23Q9H3S7 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC36.81■■■■□ 3.48
PTPN23Q9H3S7 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC36.81■■■■□ 3.48
PTPN23Q9H3S7 LONRF2P2-201ENST00000439212 571 ntBASIC36.8■■■■□ 3.48
PTPN23Q9H3S7 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC36.8■■■■□ 3.48
PTPN23Q9H3S7 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC36.79■■■■□ 3.48
PTPN23Q9H3S7 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC36.79■■■■□ 3.48
PTPN23Q9H3S7 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC36.79■■■■□ 3.48
PTPN23Q9H3S7 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC36.79■■■■□ 3.48
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms