Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
ATXN3LQ9H3M9 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC25.5■■□□□ 1.67
ATXN3LQ9H3M9 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
ATXN3LQ9H3M9 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC25.49■■□□□ 1.67
ATXN3LQ9H3M9 AC103834.1-201ENST00000520383 144 ntBASIC25.49■■□□□ 1.67
ATXN3LQ9H3M9 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
ATXN3LQ9H3M9 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
ATXN3LQ9H3M9 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
ATXN3LQ9H3M9 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC25.48■■□□□ 1.67
ATXN3LQ9H3M9 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC25.48■■□□□ 1.67
ATXN3LQ9H3M9 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
ATXN3LQ9H3M9 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
ATXN3LQ9H3M9 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
ATXN3LQ9H3M9 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC25.46■■□□□ 1.67
ATXN3LQ9H3M9 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
ATXN3LQ9H3M9 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC25.46■■□□□ 1.67
ATXN3LQ9H3M9 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
ATXN3LQ9H3M9 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
ATXN3LQ9H3M9 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
ATXN3LQ9H3M9 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
ATXN3LQ9H3M9 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
ATXN3LQ9H3M9 IDNK-201ENST00000376417 511 ntTSL 5 BASIC25.44■■□□□ 1.66
ATXN3LQ9H3M9 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
ATXN3LQ9H3M9 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
ATXN3LQ9H3M9 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
ATXN3LQ9H3M9 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC25.43■■□□□ 1.66
ATXN3LQ9H3M9 MTX2-204ENST00000443241 799 ntTSL 3 BASIC25.43■■□□□ 1.66
ATXN3LQ9H3M9 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC25.43■■□□□ 1.66
ATXN3LQ9H3M9 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
ATXN3LQ9H3M9 MIR4508-201ENST00000584178 70 ntBASIC25.42■■□□□ 1.66
ATXN3LQ9H3M9 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
ATXN3LQ9H3M9 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
ATXN3LQ9H3M9 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
ATXN3LQ9H3M9 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
ATXN3LQ9H3M9 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC25.41■■□□□ 1.66
ATXN3LQ9H3M9 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC25.41■■□□□ 1.66
ATXN3LQ9H3M9 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC25.41■■□□□ 1.66
ATXN3LQ9H3M9 TRIR-205ENST00000592273 783 ntTSL 3 BASIC25.41■■□□□ 1.66
ATXN3LQ9H3M9 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
ATXN3LQ9H3M9 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
ATXN3LQ9H3M9 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
ATXN3LQ9H3M9 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
ATXN3LQ9H3M9 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
ATXN3LQ9H3M9 AC087393.1-201ENST00000582896 145 ntBASIC25.4■■□□□ 1.66
ATXN3LQ9H3M9 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
ATXN3LQ9H3M9 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
ATXN3LQ9H3M9 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
ATXN3LQ9H3M9 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.66
ATXN3LQ9H3M9 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
ATXN3LQ9H3M9 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC25.39■■□□□ 1.66
ATXN3LQ9H3M9 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
ATXN3LQ9H3M9 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
ATXN3LQ9H3M9 AC009299.2-201ENST00000482477 511 ntBASIC25.39■■□□□ 1.66
ATXN3LQ9H3M9 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
ATXN3LQ9H3M9 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC25.39■■□□□ 1.66
ATXN3LQ9H3M9 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
ATXN3LQ9H3M9 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
ATXN3LQ9H3M9 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC25.39■■□□□ 1.65
ATXN3LQ9H3M9 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC25.38■■□□□ 1.65
ATXN3LQ9H3M9 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
ATXN3LQ9H3M9 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
ATXN3LQ9H3M9 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
ATXN3LQ9H3M9 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
ATXN3LQ9H3M9 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
ATXN3LQ9H3M9 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
ATXN3LQ9H3M9 RPS2P7-201ENST00000447334 885 ntBASIC25.37■■□□□ 1.65
ATXN3LQ9H3M9 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
ATXN3LQ9H3M9 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC25.37■■□□□ 1.65
ATXN3LQ9H3M9 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC25.37■■□□□ 1.65
ATXN3LQ9H3M9 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC25.36■■□□□ 1.65
ATXN3LQ9H3M9 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC25.36■■□□□ 1.65
ATXN3LQ9H3M9 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
ATXN3LQ9H3M9 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
ATXN3LQ9H3M9 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC25.36■■□□□ 1.65
ATXN3LQ9H3M9 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
ATXN3LQ9H3M9 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
ATXN3LQ9H3M9 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC25.36■■□□□ 1.65
ATXN3LQ9H3M9 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
ATXN3LQ9H3M9 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
ATXN3LQ9H3M9 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
ATXN3LQ9H3M9 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
ATXN3LQ9H3M9 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
ATXN3LQ9H3M9 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
ATXN3LQ9H3M9 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
ATXN3LQ9H3M9 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC25.34■■□□□ 1.65
ATXN3LQ9H3M9 AC019171.1-201ENST00000601251 1056 ntBASIC25.34■■□□□ 1.65
ATXN3LQ9H3M9 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
ATXN3LQ9H3M9 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
ATXN3LQ9H3M9 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC25.34■■□□□ 1.65
ATXN3LQ9H3M9 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC25.34■■□□□ 1.65
ATXN3LQ9H3M9 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
ATXN3LQ9H3M9 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
ATXN3LQ9H3M9 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
ATXN3LQ9H3M9 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
ATXN3LQ9H3M9 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
ATXN3LQ9H3M9 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
ATXN3LQ9H3M9 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC25.33■■□□□ 1.65
ATXN3LQ9H3M9 AC103724.3-201ENST00000564481 992 ntBASIC25.33■■□□□ 1.65
ATXN3LQ9H3M9 AL121749.1-202ENST00000609313 2153 ntBASIC25.33■■□□□ 1.65
ATXN3LQ9H3M9 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms