Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 AC142472.1-201ENST00000612013 1741 ntBASIC16.7■□□□□ 0.26
UPK3BQ9BT76 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
UPK3BQ9BT76 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
UPK3BQ9BT76 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
UPK3BQ9BT76 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UPK3BQ9BT76 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UPK3BQ9BT76 GUK1-208ENST00000366728 842 ntTSL 2 BASIC16.69■□□□□ 0.26
UPK3BQ9BT76 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC16.69■□□□□ 0.26
UPK3BQ9BT76 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UPK3BQ9BT76 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC16.69■□□□□ 0.26
UPK3BQ9BT76 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
UPK3BQ9BT76 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC16.69■□□□□ 0.26
UPK3BQ9BT76 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
UPK3BQ9BT76 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
UPK3BQ9BT76 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
UPK3BQ9BT76 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
UPK3BQ9BT76 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
UPK3BQ9BT76 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC16.68■□□□□ 0.26
UPK3BQ9BT76 DUX4L9-201ENST00000449051 1259 ntBASIC16.68■□□□□ 0.26
UPK3BQ9BT76 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC16.68■□□□□ 0.26
UPK3BQ9BT76 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UPK3BQ9BT76 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
UPK3BQ9BT76 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
UPK3BQ9BT76 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC16.67■□□□□ 0.26
UPK3BQ9BT76 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
UPK3BQ9BT76 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UPK3BQ9BT76 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UPK3BQ9BT76 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
UPK3BQ9BT76 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UPK3BQ9BT76 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UPK3BQ9BT76 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
UPK3BQ9BT76 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UPK3BQ9BT76 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC16.66■□□□□ 0.26
UPK3BQ9BT76 AC018755.3-202ENST00000596210 929 ntBASIC16.66■□□□□ 0.26
UPK3BQ9BT76 MIR6765-201ENST00000614092 87 ntBASIC16.66■□□□□ 0.26
UPK3BQ9BT76 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC16.66■□□□□ 0.26
UPK3BQ9BT76 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
UPK3BQ9BT76 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC16.65■□□□□ 0.26
UPK3BQ9BT76 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
UPK3BQ9BT76 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UPK3BQ9BT76 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
UPK3BQ9BT76 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UPK3BQ9BT76 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
UPK3BQ9BT76 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC16.65■□□□□ 0.26
UPK3BQ9BT76 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
UPK3BQ9BT76 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UPK3BQ9BT76 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
UPK3BQ9BT76 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
UPK3BQ9BT76 SPCS2P3-201ENST00000500401 656 ntBASIC16.64■□□□□ 0.25
UPK3BQ9BT76 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UPK3BQ9BT76 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC16.64■□□□□ 0.25
UPK3BQ9BT76 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC16.64■□□□□ 0.25
UPK3BQ9BT76 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC16.64■□□□□ 0.25
UPK3BQ9BT76 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC16.64■□□□□ 0.25
UPK3BQ9BT76 PKM-204ENST00000449901 2526 ntTSL 2 BASIC16.64■□□□□ 0.25
UPK3BQ9BT76 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
UPK3BQ9BT76 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
UPK3BQ9BT76 SHF-207ENST00000560540 2062 ntTSL 5 BASIC16.63■□□□□ 0.25
UPK3BQ9BT76 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
UPK3BQ9BT76 HYI-210ENST00000486909 905 ntTSL 5 BASIC16.63■□□□□ 0.25
UPK3BQ9BT76 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC16.63■□□□□ 0.25
UPK3BQ9BT76 AC074183.2-201ENST00000623112 922 ntBASIC16.63■□□□□ 0.25
UPK3BQ9BT76 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
UPK3BQ9BT76 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UPK3BQ9BT76 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UPK3BQ9BT76 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
UPK3BQ9BT76 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UPK3BQ9BT76 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
UPK3BQ9BT76 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UPK3BQ9BT76 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UPK3BQ9BT76 KRT18P10-201ENST00000388836 1287 ntBASIC16.62■□□□□ 0.25
UPK3BQ9BT76 IDNK-203ENST00000405990 629 ntTSL 2 BASIC16.62■□□□□ 0.25
UPK3BQ9BT76 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UPK3BQ9BT76 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC16.62■□□□□ 0.25
UPK3BQ9BT76 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC16.62■□□□□ 0.25
UPK3BQ9BT76 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC16.62■□□□□ 0.25
UPK3BQ9BT76 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC16.62■□□□□ 0.25
UPK3BQ9BT76 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
UPK3BQ9BT76 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
UPK3BQ9BT76 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UPK3BQ9BT76 AP004609.3-201ENST00000610705 1884 ntBASIC16.61■□□□□ 0.25
UPK3BQ9BT76 DUX4L18-201ENST00000553347 1267 ntBASIC16.61■□□□□ 0.25
UPK3BQ9BT76 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
UPK3BQ9BT76 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UPK3BQ9BT76 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UPK3BQ9BT76 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UPK3BQ9BT76 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
UPK3BQ9BT76 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
UPK3BQ9BT76 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
UPK3BQ9BT76 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC16.6■□□□□ 0.25
UPK3BQ9BT76 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UPK3BQ9BT76 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
UPK3BQ9BT76 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
UPK3BQ9BT76 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
UPK3BQ9BT76 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UPK3BQ9BT76 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UPK3BQ9BT76 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
UPK3BQ9BT76 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UPK3BQ9BT76 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
UPK3BQ9BT76 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms