Protein–RNA interactions for Protein: Q96RT7

TUBGCP6, Gamma-tubulin complex component 6, humanhuman

Predictions only

Length 1,819 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP6Q96RT7 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
TUBGCP6Q96RT7 AC019171.1-201ENST00000601251 1056 ntBASIC31.58■■■□□ 2.65
TUBGCP6Q96RT7 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
TUBGCP6Q96RT7 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC31.58■■■□□ 2.65
TUBGCP6Q96RT7 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC31.57■■■□□ 2.64
TUBGCP6Q96RT7 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC31.57■■■□□ 2.64
TUBGCP6Q96RT7 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC31.56■■■□□ 2.64
TUBGCP6Q96RT7 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC31.56■■■□□ 2.64
TUBGCP6Q96RT7 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC31.56■■■□□ 2.64
TUBGCP6Q96RT7 PEMT-206ENST00000435340 960 ntTSL 5 BASIC31.55■■■□□ 2.64
TUBGCP6Q96RT7 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC31.55■■■□□ 2.64
TUBGCP6Q96RT7 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC31.55■■■□□ 2.64
TUBGCP6Q96RT7 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
TUBGCP6Q96RT7 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
TUBGCP6Q96RT7 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC31.53■■■□□ 2.64
TUBGCP6Q96RT7 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
TUBGCP6Q96RT7 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC31.52■■■□□ 2.64
TUBGCP6Q96RT7 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC31.52■■■□□ 2.64
TUBGCP6Q96RT7 AL359504.2-201ENST00000605506 1601 ntBASIC31.52■■■□□ 2.64
TUBGCP6Q96RT7 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC31.52■■■□□ 2.64
TUBGCP6Q96RT7 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
TUBGCP6Q96RT7 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
TUBGCP6Q96RT7 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
TUBGCP6Q96RT7 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC31.51■■■□□ 2.63
TUBGCP6Q96RT7 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
TUBGCP6Q96RT7 AC087393.1-201ENST00000582896 145 ntBASIC31.51■■■□□ 2.63
TUBGCP6Q96RT7 MIR4787-201ENST00000607364 84 ntBASIC31.51■■■□□ 2.63
TUBGCP6Q96RT7 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC31.5■■■□□ 2.63
TUBGCP6Q96RT7 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
TUBGCP6Q96RT7 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC31.5■■■□□ 2.63
TUBGCP6Q96RT7 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
TUBGCP6Q96RT7 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC31.49■■■□□ 2.63
TUBGCP6Q96RT7 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC31.49■■■□□ 2.63
TUBGCP6Q96RT7 AC142086.6-201ENST00000621154 1765 ntBASIC31.49■■■□□ 2.63
TUBGCP6Q96RT7 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC31.49■■■□□ 2.63
TUBGCP6Q96RT7 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC31.48■■■□□ 2.63
TUBGCP6Q96RT7 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC31.48■■■□□ 2.63
TUBGCP6Q96RT7 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
TUBGCP6Q96RT7 BX664725.1-201ENST00000438252 379 ntBASIC31.47■■■□□ 2.63
TUBGCP6Q96RT7 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
TUBGCP6Q96RT7 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC31.47■■■□□ 2.63
TUBGCP6Q96RT7 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
TUBGCP6Q96RT7 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
TUBGCP6Q96RT7 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC31.47■■■□□ 2.63
TUBGCP6Q96RT7 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC31.46■■■□□ 2.63
TUBGCP6Q96RT7 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC31.46■■■□□ 2.63
TUBGCP6Q96RT7 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC31.46■■■□□ 2.63
TUBGCP6Q96RT7 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
TUBGCP6Q96RT7 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
TUBGCP6Q96RT7 LONRF2P2-201ENST00000439212 571 ntBASIC31.46■■■□□ 2.63
TUBGCP6Q96RT7 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC31.46■■■□□ 2.63
TUBGCP6Q96RT7 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
TUBGCP6Q96RT7 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC31.45■■■□□ 2.63
TUBGCP6Q96RT7 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
TUBGCP6Q96RT7 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.63
TUBGCP6Q96RT7 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
TUBGCP6Q96RT7 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
TUBGCP6Q96RT7 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
TUBGCP6Q96RT7 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC31.45■■■□□ 2.62
TUBGCP6Q96RT7 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
TUBGCP6Q96RT7 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC31.44■■■□□ 2.62
TUBGCP6Q96RT7 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC31.44■■■□□ 2.62
TUBGCP6Q96RT7 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
TUBGCP6Q96RT7 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
TUBGCP6Q96RT7 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
TUBGCP6Q96RT7 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
TUBGCP6Q96RT7 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC31.42■■■□□ 2.62
TUBGCP6Q96RT7 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC31.42■■■□□ 2.62
TUBGCP6Q96RT7 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
TUBGCP6Q96RT7 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC31.42■■■□□ 2.62
TUBGCP6Q96RT7 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC31.42■■■□□ 2.62
TUBGCP6Q96RT7 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC31.41■■■□□ 2.62
TUBGCP6Q96RT7 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC31.41■■■□□ 2.62
TUBGCP6Q96RT7 RALB-208ENST00000631312 311 ntTSL 5 BASIC31.41■■■□□ 2.62
TUBGCP6Q96RT7 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
TUBGCP6Q96RT7 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC31.4■■■□□ 2.62
TUBGCP6Q96RT7 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
TUBGCP6Q96RT7 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC31.4■■■□□ 2.62
TUBGCP6Q96RT7 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
TUBGCP6Q96RT7 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
TUBGCP6Q96RT7 KRT125P-201ENST00000546827 989 ntBASIC31.39■■■□□ 2.62
TUBGCP6Q96RT7 TRIR-202ENST00000588213 841 ntTSL 3 BASIC31.39■■■□□ 2.62
TUBGCP6Q96RT7 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
TUBGCP6Q96RT7 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
TUBGCP6Q96RT7 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC31.38■■■□□ 2.61
TUBGCP6Q96RT7 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC31.38■■■□□ 2.61
TUBGCP6Q96RT7 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
TUBGCP6Q96RT7 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC31.38■■■□□ 2.61
TUBGCP6Q96RT7 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC31.37■■■□□ 2.61
TUBGCP6Q96RT7 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
TUBGCP6Q96RT7 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
TUBGCP6Q96RT7 AC110285.6-201ENST00000617652 491 ntBASIC31.37■■■□□ 2.61
TUBGCP6Q96RT7 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC31.37■■■□□ 2.61
TUBGCP6Q96RT7 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
TUBGCP6Q96RT7 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
TUBGCP6Q96RT7 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
TUBGCP6Q96RT7 RPS2P7-201ENST00000447334 885 ntBASIC31.35■■■□□ 2.61
TUBGCP6Q96RT7 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC31.35■■■□□ 2.61
TUBGCP6Q96RT7 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
TUBGCP6Q96RT7 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms