Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
DUX3Q96PT4 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
DUX3Q96PT4 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
DUX3Q96PT4 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC18.75■□□□□ 0.59
DUX3Q96PT4 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
DUX3Q96PT4 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
DUX3Q96PT4 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
DUX3Q96PT4 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
DUX3Q96PT4 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
DUX3Q96PT4 AP004609.3-201ENST00000610705 1884 ntBASIC18.74■□□□□ 0.59
DUX3Q96PT4 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC18.74■□□□□ 0.59
DUX3Q96PT4 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC18.74■□□□□ 0.59
DUX3Q96PT4 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
DUX3Q96PT4 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
DUX3Q96PT4 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC18.73■□□□□ 0.59
DUX3Q96PT4 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
DUX3Q96PT4 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
DUX3Q96PT4 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
DUX3Q96PT4 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
DUX3Q96PT4 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
DUX3Q96PT4 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
DUX3Q96PT4 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
DUX3Q96PT4 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
DUX3Q96PT4 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC18.72■□□□□ 0.59
DUX3Q96PT4 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
DUX3Q96PT4 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
DUX3Q96PT4 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
DUX3Q96PT4 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
DUX3Q96PT4 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
DUX3Q96PT4 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DUX3Q96PT4 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DUX3Q96PT4 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
DUX3Q96PT4 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DUX3Q96PT4 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
DUX3Q96PT4 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DUX3Q96PT4 BEX3-202ENST00000372634 753 ntTSL 2 BASIC18.71■□□□□ 0.59
DUX3Q96PT4 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC18.71■□□□□ 0.59
DUX3Q96PT4 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DUX3Q96PT4 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
DUX3Q96PT4 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
DUX3Q96PT4 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
DUX3Q96PT4 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC18.69■□□□□ 0.58
DUX3Q96PT4 AC142472.1-201ENST00000612013 1741 ntBASIC18.69■□□□□ 0.58
DUX3Q96PT4 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
DUX3Q96PT4 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
DUX3Q96PT4 HYI-210ENST00000486909 905 ntTSL 5 BASIC18.69■□□□□ 0.58
DUX3Q96PT4 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC18.69■□□□□ 0.58
DUX3Q96PT4 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC18.69■□□□□ 0.58
DUX3Q96PT4 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DUX3Q96PT4 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DUX3Q96PT4 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DUX3Q96PT4 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DUX3Q96PT4 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC18.68■□□□□ 0.58
DUX3Q96PT4 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC18.68■□□□□ 0.58
DUX3Q96PT4 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
DUX3Q96PT4 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC18.68■□□□□ 0.58
DUX3Q96PT4 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC18.68■□□□□ 0.58
DUX3Q96PT4 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DUX3Q96PT4 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DUX3Q96PT4 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DUX3Q96PT4 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DUX3Q96PT4 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DUX3Q96PT4 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
DUX3Q96PT4 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DUX3Q96PT4 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC18.67■□□□□ 0.58
DUX3Q96PT4 PVT1_1.1-201ENST00000615125 194 ntBASIC18.67■□□□□ 0.58
DUX3Q96PT4 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DUX3Q96PT4 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DUX3Q96PT4 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
DUX3Q96PT4 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC18.67■□□□□ 0.58
DUX3Q96PT4 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
DUX3Q96PT4 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
DUX3Q96PT4 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
DUX3Q96PT4 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DUX3Q96PT4 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC18.66■□□□□ 0.58
DUX3Q96PT4 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DUX3Q96PT4 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DUX3Q96PT4 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
DUX3Q96PT4 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DUX3Q96PT4 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
DUX3Q96PT4 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
DUX3Q96PT4 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DUX3Q96PT4 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC18.64■□□□□ 0.57
DUX3Q96PT4 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DUX3Q96PT4 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DUX3Q96PT4 IDNK-203ENST00000405990 629 ntTSL 2 BASIC18.64■□□□□ 0.57
DUX3Q96PT4 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC18.64■□□□□ 0.57
DUX3Q96PT4 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC18.64■□□□□ 0.57
DUX3Q96PT4 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC18.64■□□□□ 0.57
DUX3Q96PT4 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DUX3Q96PT4 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.64■□□□□ 0.57
DUX3Q96PT4 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DUX3Q96PT4 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DUX3Q96PT4 SHF-208ENST00000560734 1731 ntTSL 3 BASIC18.63■□□□□ 0.57
DUX3Q96PT4 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DUX3Q96PT4 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
DUX3Q96PT4 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DUX3Q96PT4 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC18.63■□□□□ 0.57
DUX3Q96PT4 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC18.62■□□□□ 0.57
DUX3Q96PT4 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 9.7 ms