Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC142381.2-201ENST00000566120 298 ntBASIC26.6■■□□□ 1.85
LRCH3Q96II8 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC26.6■■□□□ 1.85
LRCH3Q96II8 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
LRCH3Q96II8 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC26.59■■□□□ 1.85
LRCH3Q96II8 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC26.59■■□□□ 1.85
LRCH3Q96II8 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC26.59■■□□□ 1.85
LRCH3Q96II8 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
LRCH3Q96II8 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
LRCH3Q96II8 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
LRCH3Q96II8 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC26.58■■□□□ 1.85
LRCH3Q96II8 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.58■■□□□ 1.85
LRCH3Q96II8 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
LRCH3Q96II8 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC26.58■■□□□ 1.85
LRCH3Q96II8 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC26.58■■□□□ 1.85
LRCH3Q96II8 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
LRCH3Q96II8 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
LRCH3Q96II8 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
LRCH3Q96II8 MIR3621-201ENST00000580529 85 ntBASIC26.57■■□□□ 1.84
LRCH3Q96II8 ANKRD20A6P-201ENST00000618763 204 ntBASIC26.57■■□□□ 1.84
LRCH3Q96II8 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
LRCH3Q96II8 AC021242.3-201ENST00000607598 1377 ntBASIC26.57■■□□□ 1.84
LRCH3Q96II8 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC26.56■■□□□ 1.84
LRCH3Q96II8 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
LRCH3Q96II8 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
LRCH3Q96II8 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
LRCH3Q96II8 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
LRCH3Q96II8 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
LRCH3Q96II8 TK2-202ENST00000417693 1046 ntTSL 2 BASIC26.55■■□□□ 1.84
LRCH3Q96II8 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC26.55■■□□□ 1.84
LRCH3Q96II8 AC137630.3-201ENST00000607245 391 ntBASIC26.55■■□□□ 1.84
LRCH3Q96II8 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
LRCH3Q96II8 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
LRCH3Q96II8 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
LRCH3Q96II8 RPS2P7-201ENST00000447334 885 ntBASIC26.54■■□□□ 1.84
LRCH3Q96II8 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
LRCH3Q96II8 AC092028.1-203ENST00000608262 953 ntBASIC26.54■■□□□ 1.84
LRCH3Q96II8 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC26.53■■□□□ 1.84
LRCH3Q96II8 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC26.53■■□□□ 1.84
LRCH3Q96II8 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC26.53■■□□□ 1.84
LRCH3Q96II8 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
LRCH3Q96II8 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
LRCH3Q96II8 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
LRCH3Q96II8 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
LRCH3Q96II8 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC26.51■■□□□ 1.84
LRCH3Q96II8 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC26.51■■□□□ 1.83
LRCH3Q96II8 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC26.51■■□□□ 1.83
LRCH3Q96II8 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC26.51■■□□□ 1.83
LRCH3Q96II8 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC26.51■■□□□ 1.83
LRCH3Q96II8 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
LRCH3Q96II8 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
LRCH3Q96II8 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
LRCH3Q96II8 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
LRCH3Q96II8 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
LRCH3Q96II8 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
LRCH3Q96II8 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
LRCH3Q96II8 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
LRCH3Q96II8 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC26.49■■□□□ 1.83
LRCH3Q96II8 PBX2P1-201ENST00000493219 1291 ntBASIC26.49■■□□□ 1.83
LRCH3Q96II8 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
LRCH3Q96II8 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC26.48■■□□□ 1.83
LRCH3Q96II8 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC26.48■■□□□ 1.83
LRCH3Q96II8 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
LRCH3Q96II8 AC106739.1-201ENST00000617035 715 ntBASIC26.48■■□□□ 1.83
LRCH3Q96II8 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
LRCH3Q96II8 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
LRCH3Q96II8 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
LRCH3Q96II8 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
LRCH3Q96II8 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
LRCH3Q96II8 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
LRCH3Q96II8 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
LRCH3Q96II8 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
LRCH3Q96II8 KRT18P24-201ENST00000344739 1156 ntBASIC26.46■■□□□ 1.83
LRCH3Q96II8 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC26.46■■□□□ 1.83
LRCH3Q96II8 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
LRCH3Q96II8 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26.46■■□□□ 1.83
LRCH3Q96II8 GLI3-203ENST00000437480 451 ntTSL 2 BASIC26.45■■□□□ 1.82
LRCH3Q96II8 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC26.45■■□□□ 1.82
LRCH3Q96II8 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
LRCH3Q96II8 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
LRCH3Q96II8 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
LRCH3Q96II8 AL356740.2-201ENST00000601559 647 ntBASIC26.44■■□□□ 1.82
LRCH3Q96II8 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
LRCH3Q96II8 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC26.44■■□□□ 1.82
LRCH3Q96II8 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
LRCH3Q96II8 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC26.43■■□□□ 1.82
LRCH3Q96II8 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
LRCH3Q96II8 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
LRCH3Q96II8 QDPR-206ENST00000508623 601 ntTSL 3 BASIC26.42■■□□□ 1.82
LRCH3Q96II8 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC26.42■■□□□ 1.82
LRCH3Q96II8 AC010997.5-201ENST00000609182 354 ntBASIC26.42■■□□□ 1.82
LRCH3Q96II8 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
LRCH3Q96II8 ABCB10P1-201ENST00000614297 2181 ntBASIC26.41■■□□□ 1.82
LRCH3Q96II8 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
LRCH3Q96II8 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
LRCH3Q96II8 MIR6724-1-201ENST00000616420 92 ntBASIC26.41■■□□□ 1.82
LRCH3Q96II8 MIR6724-2-201ENST00000616483 92 ntBASIC26.41■■□□□ 1.82
LRCH3Q96II8 MIR6724-4-201ENST00000617390 92 ntBASIC26.41■■□□□ 1.82
LRCH3Q96II8 MIR6724-3-201ENST00000622482 92 ntBASIC26.41■■□□□ 1.82
LRCH3Q96II8 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC26.41■■□□□ 1.82
LRCH3Q96II8 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms