Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC28.71■■■□□ 2.19
STAG1Q8WVM7 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
STAG1Q8WVM7 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
STAG1Q8WVM7 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC28.7■■■□□ 2.18
STAG1Q8WVM7 AC004987.1-201ENST00000428627 508 ntBASIC28.69■■■□□ 2.18
STAG1Q8WVM7 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
STAG1Q8WVM7 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC28.69■■■□□ 2.18
STAG1Q8WVM7 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
STAG1Q8WVM7 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
STAG1Q8WVM7 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC28.68■■■□□ 2.18
STAG1Q8WVM7 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC28.67■■■□□ 2.18
STAG1Q8WVM7 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC28.67■■■□□ 2.18
STAG1Q8WVM7 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC28.67■■■□□ 2.18
STAG1Q8WVM7 ATP5G2P3-201ENST00000429083 425 ntBASIC28.67■■■□□ 2.18
STAG1Q8WVM7 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC28.67■■■□□ 2.18
STAG1Q8WVM7 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC28.67■■■□□ 2.18
STAG1Q8WVM7 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
STAG1Q8WVM7 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
STAG1Q8WVM7 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
STAG1Q8WVM7 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
STAG1Q8WVM7 TSPY13P-201ENST00000338964 914 ntBASIC28.66■■■□□ 2.18
STAG1Q8WVM7 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC28.66■■■□□ 2.18
STAG1Q8WVM7 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC28.66■■■□□ 2.18
STAG1Q8WVM7 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC28.66■■■□□ 2.18
STAG1Q8WVM7 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
STAG1Q8WVM7 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC28.66■■■□□ 2.18
STAG1Q8WVM7 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
STAG1Q8WVM7 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
STAG1Q8WVM7 SPCS2P3-201ENST00000500401 656 ntBASIC28.65■■■□□ 2.18
STAG1Q8WVM7 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC28.65■■■□□ 2.18
STAG1Q8WVM7 AC129492.7-201ENST00000622992 756 ntBASIC28.65■■■□□ 2.18
STAG1Q8WVM7 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC28.65■■■□□ 2.18
STAG1Q8WVM7 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC28.65■■■□□ 2.18
STAG1Q8WVM7 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC28.65■■■□□ 2.18
STAG1Q8WVM7 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC28.64■■■□□ 2.18
STAG1Q8WVM7 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
STAG1Q8WVM7 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
STAG1Q8WVM7 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC28.64■■■□□ 2.18
STAG1Q8WVM7 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
STAG1Q8WVM7 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
STAG1Q8WVM7 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC28.63■■■□□ 2.17
STAG1Q8WVM7 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
STAG1Q8WVM7 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC28.63■■■□□ 2.17
STAG1Q8WVM7 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
STAG1Q8WVM7 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC28.63■■■□□ 2.17
STAG1Q8WVM7 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
STAG1Q8WVM7 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
STAG1Q8WVM7 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC28.62■■■□□ 2.17
STAG1Q8WVM7 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC28.62■■■□□ 2.17
STAG1Q8WVM7 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC28.62■■■□□ 2.17
STAG1Q8WVM7 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
STAG1Q8WVM7 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
STAG1Q8WVM7 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
STAG1Q8WVM7 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC28.61■■■□□ 2.17
STAG1Q8WVM7 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
STAG1Q8WVM7 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC28.61■■■□□ 2.17
STAG1Q8WVM7 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC28.61■■■□□ 2.17
STAG1Q8WVM7 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC28.61■■■□□ 2.17
STAG1Q8WVM7 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC28.61■■■□□ 2.17
STAG1Q8WVM7 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC28.6■■■□□ 2.17
STAG1Q8WVM7 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
STAG1Q8WVM7 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC28.6■■■□□ 2.17
STAG1Q8WVM7 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
STAG1Q8WVM7 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
STAG1Q8WVM7 DUX4L9-201ENST00000449051 1259 ntBASIC28.59■■■□□ 2.17
STAG1Q8WVM7 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
STAG1Q8WVM7 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC28.59■■■□□ 2.17
STAG1Q8WVM7 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
STAG1Q8WVM7 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
STAG1Q8WVM7 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC28.58■■■□□ 2.17
STAG1Q8WVM7 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC28.58■■■□□ 2.17
STAG1Q8WVM7 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC28.58■■■□□ 2.17
STAG1Q8WVM7 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
STAG1Q8WVM7 GUK1-208ENST00000366728 842 ntTSL 2 BASIC28.57■■■□□ 2.16
STAG1Q8WVM7 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
STAG1Q8WVM7 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
STAG1Q8WVM7 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
STAG1Q8WVM7 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC28.56■■■□□ 2.16
STAG1Q8WVM7 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
STAG1Q8WVM7 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC28.56■■■□□ 2.16
STAG1Q8WVM7 AC092803.2-201ENST00000564287 1899 ntBASIC28.55■■■□□ 2.16
STAG1Q8WVM7 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
STAG1Q8WVM7 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
STAG1Q8WVM7 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC28.55■■■□□ 2.16
STAG1Q8WVM7 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
STAG1Q8WVM7 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC28.54■■■□□ 2.16
STAG1Q8WVM7 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC28.54■■■□□ 2.16
STAG1Q8WVM7 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC28.54■■■□□ 2.16
STAG1Q8WVM7 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
STAG1Q8WVM7 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
STAG1Q8WVM7 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
STAG1Q8WVM7 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
STAG1Q8WVM7 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
STAG1Q8WVM7 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC28.53■■■□□ 2.16
STAG1Q8WVM7 ERN1-208ENST00000606895 2068 ntBASIC28.52■■■□□ 2.16
STAG1Q8WVM7 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
STAG1Q8WVM7 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
STAG1Q8WVM7 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
STAG1Q8WVM7 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.16
STAG1Q8WVM7 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC28.51■■■□□ 2.15
Retrieved 100 of 98,524 protein–RNA pairs in 9.8 ms