Protein–RNA interactions for Protein: Q8WUY3

PRUNE2, Protein prune homolog 2, humanhuman

Predictions only

Length 3,088 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2Q8WUY3 AC092028.1-203ENST00000608262 953 ntBASIC25.92■■□□□ 1.74
PRUNE2Q8WUY3 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC25.92■■□□□ 1.74
PRUNE2Q8WUY3 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC25.91■■□□□ 1.74
PRUNE2Q8WUY3 AL031432.3-201ENST00000607698 485 ntBASIC25.91■■□□□ 1.74
PRUNE2Q8WUY3 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC25.91■■□□□ 1.74
PRUNE2Q8WUY3 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC25.91■■□□□ 1.74
PRUNE2Q8WUY3 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
PRUNE2Q8WUY3 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
PRUNE2Q8WUY3 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC25.91■■□□□ 1.74
PRUNE2Q8WUY3 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
PRUNE2Q8WUY3 RPS2P7-201ENST00000447334 885 ntBASIC25.9■■□□□ 1.74
PRUNE2Q8WUY3 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC25.9■■□□□ 1.74
PRUNE2Q8WUY3 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC25.9■■□□□ 1.74
PRUNE2Q8WUY3 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC25.9■■□□□ 1.74
PRUNE2Q8WUY3 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC25.9■■□□□ 1.74
PRUNE2Q8WUY3 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC25.9■■□□□ 1.74
PRUNE2Q8WUY3 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.74
PRUNE2Q8WUY3 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PRUNE2Q8WUY3 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC25.88■■□□□ 1.73
PRUNE2Q8WUY3 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC25.88■■□□□ 1.73
PRUNE2Q8WUY3 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PRUNE2Q8WUY3 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC25.87■■□□□ 1.73
PRUNE2Q8WUY3 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PRUNE2Q8WUY3 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC25.86■■□□□ 1.73
PRUNE2Q8WUY3 AL162430.1-201ENST00000480705 870 ntBASIC25.86■■□□□ 1.73
PRUNE2Q8WUY3 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC25.86■■□□□ 1.73
PRUNE2Q8WUY3 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC25.86■■□□□ 1.73
PRUNE2Q8WUY3 AC137630.3-201ENST00000607245 391 ntBASIC25.86■■□□□ 1.73
PRUNE2Q8WUY3 ANKRD20A6P-201ENST00000618763 204 ntBASIC25.86■■□□□ 1.73
PRUNE2Q8WUY3 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
PRUNE2Q8WUY3 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
PRUNE2Q8WUY3 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PRUNE2Q8WUY3 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PRUNE2Q8WUY3 AL359504.2-201ENST00000605506 1601 ntBASIC25.85■■□□□ 1.73
PRUNE2Q8WUY3 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PRUNE2Q8WUY3 AC087623.3-201ENST00000607047 1098 ntBASIC25.85■■□□□ 1.73
PRUNE2Q8WUY3 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC25.85■■□□□ 1.73
PRUNE2Q8WUY3 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
PRUNE2Q8WUY3 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PRUNE2Q8WUY3 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
PRUNE2Q8WUY3 AC142381.2-201ENST00000566120 298 ntBASIC25.84■■□□□ 1.73
PRUNE2Q8WUY3 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PRUNE2Q8WUY3 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
PRUNE2Q8WUY3 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.73
PRUNE2Q8WUY3 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PRUNE2Q8WUY3 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
PRUNE2Q8WUY3 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
PRUNE2Q8WUY3 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
PRUNE2Q8WUY3 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC25.82■■□□□ 1.72
PRUNE2Q8WUY3 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC25.82■■□□□ 1.72
PRUNE2Q8WUY3 LSM4-201ENST00000252816 986 ntTSL 2 BASIC25.81■■□□□ 1.72
PRUNE2Q8WUY3 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PRUNE2Q8WUY3 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
PRUNE2Q8WUY3 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC25.81■■□□□ 1.72
PRUNE2Q8WUY3 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
PRUNE2Q8WUY3 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PRUNE2Q8WUY3 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PRUNE2Q8WUY3 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
PRUNE2Q8WUY3 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PRUNE2Q8WUY3 AC097381.1-201ENST00000429019 1296 ntBASIC25.79■■□□□ 1.72
PRUNE2Q8WUY3 PLD4-205ENST00000553861 667 ntTSL 2 BASIC25.79■■□□□ 1.72
PRUNE2Q8WUY3 MIR6821-201ENST00000617625 74 ntBASIC25.79■■□□□ 1.72
PRUNE2Q8WUY3 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC25.79■■□□□ 1.72
PRUNE2Q8WUY3 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
PRUNE2Q8WUY3 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC25.79■■□□□ 1.72
PRUNE2Q8WUY3 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
PRUNE2Q8WUY3 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC25.78■■□□□ 1.72
PRUNE2Q8WUY3 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC25.78■■□□□ 1.72
PRUNE2Q8WUY3 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
PRUNE2Q8WUY3 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
PRUNE2Q8WUY3 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PRUNE2Q8WUY3 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC25.77■■□□□ 1.72
PRUNE2Q8WUY3 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC25.77■■□□□ 1.72
PRUNE2Q8WUY3 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC25.77■■□□□ 1.72
PRUNE2Q8WUY3 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PRUNE2Q8WUY3 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC25.77■■□□□ 1.72
PRUNE2Q8WUY3 PARL-206ENST00000435888 1098 ntTSL 5 BASIC25.76■■□□□ 1.71
PRUNE2Q8WUY3 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC25.76■■□□□ 1.71
PRUNE2Q8WUY3 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC25.76■■□□□ 1.71
PRUNE2Q8WUY3 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC25.76■■□□□ 1.71
PRUNE2Q8WUY3 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
PRUNE2Q8WUY3 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
PRUNE2Q8WUY3 DENND3-207ENST00000518347 850 ntTSL 2 BASIC25.75■■□□□ 1.71
PRUNE2Q8WUY3 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
PRUNE2Q8WUY3 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
PRUNE2Q8WUY3 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC25.75■■□□□ 1.71
PRUNE2Q8WUY3 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC25.75■■□□□ 1.71
PRUNE2Q8WUY3 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
PRUNE2Q8WUY3 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
PRUNE2Q8WUY3 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
PRUNE2Q8WUY3 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC25.75■■□□□ 1.71
PRUNE2Q8WUY3 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC25.75■■□□□ 1.71
PRUNE2Q8WUY3 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC25.75■■□□□ 1.71
PRUNE2Q8WUY3 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC25.74■■□□□ 1.71
PRUNE2Q8WUY3 KRT18P24-201ENST00000344739 1156 ntBASIC25.74■■□□□ 1.71
PRUNE2Q8WUY3 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC25.74■■□□□ 1.71
PRUNE2Q8WUY3 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC25.74■■□□□ 1.71
PRUNE2Q8WUY3 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC25.73■■□□□ 1.71
PRUNE2Q8WUY3 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC25.73■■□□□ 1.71
PRUNE2Q8WUY3 RASSF1-AS1-201ENST00000629828 790 ntBASIC25.73■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms