Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.5■□□□□ 0.87
CLDND2Q8NHS1 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLDND2Q8NHS1 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLDND2Q8NHS1 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLDND2Q8NHS1 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
CLDND2Q8NHS1 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.49■□□□□ 0.87
CLDND2Q8NHS1 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLDND2Q8NHS1 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.49■□□□□ 0.87
CLDND2Q8NHS1 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
CLDND2Q8NHS1 RARRES2P1-201ENST00000474487 481 ntBASIC20.49■□□□□ 0.87
CLDND2Q8NHS1 SPCS2P3-201ENST00000500401 656 ntBASIC20.49■□□□□ 0.87
CLDND2Q8NHS1 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLDND2Q8NHS1 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.49■□□□□ 0.87
CLDND2Q8NHS1 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CLDND2Q8NHS1 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CLDND2Q8NHS1 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CLDND2Q8NHS1 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLDND2Q8NHS1 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLDND2Q8NHS1 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CLDND2Q8NHS1 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CLDND2Q8NHS1 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLDND2Q8NHS1 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLDND2Q8NHS1 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.46■□□□□ 0.87
CLDND2Q8NHS1 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLDND2Q8NHS1 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.46■□□□□ 0.87
CLDND2Q8NHS1 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CLDND2Q8NHS1 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CLDND2Q8NHS1 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CLDND2Q8NHS1 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLDND2Q8NHS1 BX255925.1-201ENST00000566954 1854 ntBASIC20.45■□□□□ 0.86
CLDND2Q8NHS1 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLDND2Q8NHS1 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CLDND2Q8NHS1 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLDND2Q8NHS1 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLDND2Q8NHS1 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLDND2Q8NHS1 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLDND2Q8NHS1 BHLHE23-202ENST00000612929 1109 ntBASIC20.44■□□□□ 0.86
CLDND2Q8NHS1 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
CLDND2Q8NHS1 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CLDND2Q8NHS1 MIR6765-201ENST00000614092 87 ntBASIC20.43■□□□□ 0.86
CLDND2Q8NHS1 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.43■□□□□ 0.86
CLDND2Q8NHS1 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLDND2Q8NHS1 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CLDND2Q8NHS1 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.43■□□□□ 0.86
CLDND2Q8NHS1 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLDND2Q8NHS1 AC018755.3-202ENST00000596210 929 ntBASIC20.42■□□□□ 0.86
CLDND2Q8NHS1 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
CLDND2Q8NHS1 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.42■□□□□ 0.86
CLDND2Q8NHS1 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
CLDND2Q8NHS1 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLDND2Q8NHS1 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.41■□□□□ 0.86
CLDND2Q8NHS1 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLDND2Q8NHS1 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
CLDND2Q8NHS1 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLDND2Q8NHS1 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLDND2Q8NHS1 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLDND2Q8NHS1 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLDND2Q8NHS1 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLDND2Q8NHS1 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLDND2Q8NHS1 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CLDND2Q8NHS1 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLDND2Q8NHS1 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.4■□□□□ 0.86
CLDND2Q8NHS1 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.4■□□□□ 0.86
CLDND2Q8NHS1 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
CLDND2Q8NHS1 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.4■□□□□ 0.86
CLDND2Q8NHS1 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.4■□□□□ 0.86
CLDND2Q8NHS1 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
CLDND2Q8NHS1 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CLDND2Q8NHS1 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLDND2Q8NHS1 AC139795.1-202ENST00000500444 432 ntBASIC20.39■□□□□ 0.85
CLDND2Q8NHS1 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.39■□□□□ 0.85
CLDND2Q8NHS1 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CLDND2Q8NHS1 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.39■□□□□ 0.85
CLDND2Q8NHS1 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLDND2Q8NHS1 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.38■□□□□ 0.85
CLDND2Q8NHS1 AC010980.1-201ENST00000587192 1142 ntBASIC20.38■□□□□ 0.85
CLDND2Q8NHS1 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.38■□□□□ 0.85
CLDND2Q8NHS1 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLDND2Q8NHS1 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CLDND2Q8NHS1 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLDND2Q8NHS1 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLDND2Q8NHS1 LINC01003-201ENST00000564834 1764 ntBASIC20.37■□□□□ 0.85
CLDND2Q8NHS1 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CLDND2Q8NHS1 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.37■□□□□ 0.85
CLDND2Q8NHS1 AC074183.2-201ENST00000623112 922 ntBASIC20.37■□□□□ 0.85
CLDND2Q8NHS1 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.37■□□□□ 0.85
CLDND2Q8NHS1 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLDND2Q8NHS1 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLDND2Q8NHS1 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLDND2Q8NHS1 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLDND2Q8NHS1 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.36■□□□□ 0.85
CLDND2Q8NHS1 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLDND2Q8NHS1 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.36■□□□□ 0.85
CLDND2Q8NHS1 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLDND2Q8NHS1 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CLDND2Q8NHS1 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLDND2Q8NHS1 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLDND2Q8NHS1 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
CLDND2Q8NHS1 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.35■□□□□ 0.85
CLDND2Q8NHS1 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms