Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC35.34■■■■□ 3.25
UBR1Q8IWV7 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC35.33■■■■□ 3.25
UBR1Q8IWV7 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC35.33■■■■□ 3.25
UBR1Q8IWV7 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC35.32■■■■□ 3.25
UBR1Q8IWV7 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC35.32■■■■□ 3.25
UBR1Q8IWV7 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC35.32■■■■□ 3.25
UBR1Q8IWV7 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC35.32■■■■□ 3.24
UBR1Q8IWV7 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC35.32■■■■□ 3.24
UBR1Q8IWV7 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC35.32■■■■□ 3.24
UBR1Q8IWV7 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC35.31■■■■□ 3.24
UBR1Q8IWV7 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC35.31■■■■□ 3.24
UBR1Q8IWV7 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC35.31■■■■□ 3.24
UBR1Q8IWV7 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC35.3■■■■□ 3.24
UBR1Q8IWV7 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC35.3■■■■□ 3.24
UBR1Q8IWV7 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC35.3■■■■□ 3.24
UBR1Q8IWV7 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC35.3■■■■□ 3.24
UBR1Q8IWV7 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC35.29■■■■□ 3.24
UBR1Q8IWV7 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC35.28■■■■□ 3.24
UBR1Q8IWV7 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC35.28■■■■□ 3.24
UBR1Q8IWV7 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC35.28■■■■□ 3.24
UBR1Q8IWV7 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC35.27■■■■□ 3.24
UBR1Q8IWV7 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC35.26■■■■□ 3.24
UBR1Q8IWV7 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.24
UBR1Q8IWV7 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC35.26■■■■□ 3.24
UBR1Q8IWV7 TRIR-202ENST00000588213 841 ntTSL 3 BASIC35.26■■■■□ 3.24
UBR1Q8IWV7 AC137630.3-201ENST00000607245 391 ntBASIC35.26■■■■□ 3.24
UBR1Q8IWV7 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC35.26■■■■□ 3.24
UBR1Q8IWV7 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.24
UBR1Q8IWV7 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.24
UBR1Q8IWV7 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.24
UBR1Q8IWV7 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC35.26■■■■□ 3.23
UBR1Q8IWV7 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC35.25■■■■□ 3.23
UBR1Q8IWV7 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC35.24■■■■□ 3.23
UBR1Q8IWV7 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC35.24■■■■□ 3.23
UBR1Q8IWV7 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC35.24■■■■□ 3.23
UBR1Q8IWV7 AL139246.5-201ENST00000606645 996 ntBASIC35.24■■■■□ 3.23
UBR1Q8IWV7 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC35.24■■■■□ 3.23
UBR1Q8IWV7 AC021242.3-201ENST00000607598 1377 ntBASIC35.24■■■■□ 3.23
UBR1Q8IWV7 RALB-208ENST00000631312 311 ntTSL 5 BASIC35.23■■■■□ 3.23
UBR1Q8IWV7 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
UBR1Q8IWV7 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC35.22■■■■□ 3.23
UBR1Q8IWV7 KRT18P24-201ENST00000344739 1156 ntBASIC35.22■■■■□ 3.23
UBR1Q8IWV7 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC35.21■■■■□ 3.23
UBR1Q8IWV7 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC35.21■■■■□ 3.23
UBR1Q8IWV7 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC35.21■■■■□ 3.23
UBR1Q8IWV7 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC35.2■■■■□ 3.23
UBR1Q8IWV7 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC35.2■■■■□ 3.23
UBR1Q8IWV7 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC35.2■■■■□ 3.23
UBR1Q8IWV7 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC35.2■■■■□ 3.23
UBR1Q8IWV7 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC35.2■■■■□ 3.23
UBR1Q8IWV7 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC35.2■■■■□ 3.23
UBR1Q8IWV7 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC35.2■■■■□ 3.23
UBR1Q8IWV7 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC35.2■■■■□ 3.23
UBR1Q8IWV7 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC35.2■■■■□ 3.23
UBR1Q8IWV7 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC35.2■■■■□ 3.23
UBR1Q8IWV7 AC110285.6-201ENST00000617652 491 ntBASIC35.2■■■■□ 3.23
UBR1Q8IWV7 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC35.19■■■■□ 3.22
UBR1Q8IWV7 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC35.19■■■■□ 3.22
UBR1Q8IWV7 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC35.19■■■■□ 3.22
UBR1Q8IWV7 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC35.18■■■■□ 3.22
UBR1Q8IWV7 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC35.18■■■■□ 3.22
UBR1Q8IWV7 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC35.18■■■■□ 3.22
UBR1Q8IWV7 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC35.17■■■■□ 3.22
UBR1Q8IWV7 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC35.17■■■■□ 3.22
UBR1Q8IWV7 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC35.17■■■■□ 3.22
UBR1Q8IWV7 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC35.17■■■■□ 3.22
UBR1Q8IWV7 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC35.16■■■■□ 3.22
UBR1Q8IWV7 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC35.16■■■■□ 3.22
UBR1Q8IWV7 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC35.15■■■■□ 3.22
UBR1Q8IWV7 TSPY9P-201ENST00000440215 945 ntBASIC35.15■■■■□ 3.22
UBR1Q8IWV7 TSPY11P-201ENST00000442607 1045 ntBASIC35.15■■■■□ 3.22
UBR1Q8IWV7 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC35.15■■■■□ 3.22
UBR1Q8IWV7 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC35.15■■■■□ 3.22
UBR1Q8IWV7 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC35.15■■■■□ 3.22
UBR1Q8IWV7 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC35.15■■■■□ 3.22
UBR1Q8IWV7 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC35.15■■■■□ 3.22
UBR1Q8IWV7 NALT1-201ENST00000429224 738 ntTSL 5 BASIC35.15■■■■□ 3.22
UBR1Q8IWV7 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC35.15■■■■□ 3.22
UBR1Q8IWV7 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC35.14■■■■□ 3.22
UBR1Q8IWV7 AL117332.1-201ENST00000622628 974 ntBASIC35.14■■■■□ 3.22
UBR1Q8IWV7 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC35.14■■■■□ 3.22
UBR1Q8IWV7 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC35.14■■■■□ 3.22
UBR1Q8IWV7 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC35.13■■■■□ 3.21
UBR1Q8IWV7 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC35.12■■■■□ 3.21
UBR1Q8IWV7 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC35.12■■■■□ 3.21
UBR1Q8IWV7 MIR4281-201ENST00000580852 62 ntBASIC35.12■■■■□ 3.21
UBR1Q8IWV7 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC35.12■■■■□ 3.21
UBR1Q8IWV7 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC35.12■■■■□ 3.21
UBR1Q8IWV7 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC35.12■■■■□ 3.21
UBR1Q8IWV7 SRR-208ENST00000576848 588 ntTSL 4 BASIC35.11■■■■□ 3.21
UBR1Q8IWV7 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC35.11■■■■□ 3.21
UBR1Q8IWV7 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC35.1■■■■□ 3.21
UBR1Q8IWV7 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC35.1■■■■□ 3.21
UBR1Q8IWV7 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC35.09■■■■□ 3.21
UBR1Q8IWV7 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC35.09■■■■□ 3.21
UBR1Q8IWV7 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC35.09■■■■□ 3.21
UBR1Q8IWV7 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC35.09■■■■□ 3.21
UBR1Q8IWV7 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC35.09■■■■□ 3.21
UBR1Q8IWV7 AL136116.3-201ENST00000402907 1138 ntBASIC35.09■■■■□ 3.21
UBR1Q8IWV7 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC35.09■■■■□ 3.21
Retrieved 100 of 98,524 protein–RNA pairs in 274 ms