Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RTTNQ86VV8 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RTTNQ86VV8 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
RTTNQ86VV8 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.24■□□□□ 0.99
RTTNQ86VV8 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RTTNQ86VV8 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.24■□□□□ 0.99
RTTNQ86VV8 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTTNQ86VV8 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
RTTNQ86VV8 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.23■□□□□ 0.99
RTTNQ86VV8 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.23■□□□□ 0.99
RTTNQ86VV8 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.23■□□□□ 0.99
RTTNQ86VV8 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.23■□□□□ 0.99
RTTNQ86VV8 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTTNQ86VV8 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RTTNQ86VV8 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.23■□□□□ 0.99
RTTNQ86VV8 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTTNQ86VV8 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTTNQ86VV8 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RTTNQ86VV8 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RTTNQ86VV8 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
RTTNQ86VV8 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RTTNQ86VV8 RAP2CP1-202ENST00000605179 643 ntBASIC21.22■□□□□ 0.99
RTTNQ86VV8 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RTTNQ86VV8 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
RTTNQ86VV8 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.21■□□□□ 0.99
RTTNQ86VV8 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RTTNQ86VV8 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RTTNQ86VV8 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
RTTNQ86VV8 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
RTTNQ86VV8 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RTTNQ86VV8 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
RTTNQ86VV8 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.21■□□□□ 0.99
RTTNQ86VV8 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RTTNQ86VV8 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.21■□□□□ 0.99
RTTNQ86VV8 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.21■□□□□ 0.99
RTTNQ86VV8 AC093536.1-201ENST00000569153 554 ntBASIC21.2■□□□□ 0.98
RTTNQ86VV8 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RTTNQ86VV8 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RTTNQ86VV8 TSPY13P-201ENST00000338964 914 ntBASIC21.2■□□□□ 0.98
RTTNQ86VV8 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.19■□□□□ 0.98
RTTNQ86VV8 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC21.19■□□□□ 0.98
RTTNQ86VV8 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.19■□□□□ 0.98
RTTNQ86VV8 AC126177.7-201ENST00000547904 679 ntBASIC21.19■□□□□ 0.98
RTTNQ86VV8 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.19■□□□□ 0.98
RTTNQ86VV8 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTTNQ86VV8 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RTTNQ86VV8 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTTNQ86VV8 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.19■□□□□ 0.98
RTTNQ86VV8 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RTTNQ86VV8 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RTTNQ86VV8 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RTTNQ86VV8 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.18■□□□□ 0.98
RTTNQ86VV8 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
RTTNQ86VV8 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.18■□□□□ 0.98
RTTNQ86VV8 AC092803.2-201ENST00000564287 1899 ntBASIC21.18■□□□□ 0.98
RTTNQ86VV8 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RTTNQ86VV8 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTTNQ86VV8 MIR935-201ENST00000401179 91 ntBASIC21.17■□□□□ 0.98
RTTNQ86VV8 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RTTNQ86VV8 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTTNQ86VV8 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTTNQ86VV8 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RTTNQ86VV8 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RTTNQ86VV8 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.16■□□□□ 0.98
RTTNQ86VV8 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RTTNQ86VV8 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RTTNQ86VV8 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.16■□□□□ 0.98
RTTNQ86VV8 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.16■□□□□ 0.98
RTTNQ86VV8 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTTNQ86VV8 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTTNQ86VV8 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
RTTNQ86VV8 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.15■□□□□ 0.98
RTTNQ86VV8 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
RTTNQ86VV8 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.14■□□□□ 0.98
RTTNQ86VV8 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RTTNQ86VV8 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RTTNQ86VV8 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RTTNQ86VV8 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.14■□□□□ 0.97
RTTNQ86VV8 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RTTNQ86VV8 SMPD5-203ENST00000639008 1464 ntBASIC21.14■□□□□ 0.97
RTTNQ86VV8 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RTTNQ86VV8 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
RTTNQ86VV8 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RTTNQ86VV8 AL035685.1-201ENST00000636663 812 ntBASIC21.13■□□□□ 0.97
RTTNQ86VV8 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RTTNQ86VV8 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RTTNQ86VV8 ECEL1P2-201ENST00000461596 1295 ntBASIC21.13■□□□□ 0.97
RTTNQ86VV8 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RTTNQ86VV8 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
RTTNQ86VV8 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RTTNQ86VV8 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
RTTNQ86VV8 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.12■□□□□ 0.97
RTTNQ86VV8 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RTTNQ86VV8 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.12■□□□□ 0.97
RTTNQ86VV8 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.12■□□□□ 0.97
RTTNQ86VV8 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RTTNQ86VV8 AC091060.1-201ENST00000623524 1766 ntBASIC21.12■□□□□ 0.97
RTTNQ86VV8 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
RTTNQ86VV8 KRT18P60-201ENST00000312876 1297 ntBASIC21.11■□□□□ 0.97
RTTNQ86VV8 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms