Protein–RNA interactions for Protein: Q86T96

RNF180, E3 ubiquitin-protein ligase RNF180, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF180Q86T96 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
RNF180Q86T96 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC27.24■■□□□ 1.95
RNF180Q86T96 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
RNF180Q86T96 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
RNF180Q86T96 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
RNF180Q86T96 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC27.23■■□□□ 1.95
RNF180Q86T96 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
RNF180Q86T96 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC27.22■■□□□ 1.95
RNF180Q86T96 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
RNF180Q86T96 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
RNF180Q86T96 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
RNF180Q86T96 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
RNF180Q86T96 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC27.21■■□□□ 1.95
RNF180Q86T96 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC27.21■■□□□ 1.95
RNF180Q86T96 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC27.2■■□□□ 1.95
RNF180Q86T96 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC27.2■■□□□ 1.94
RNF180Q86T96 MIR935-201ENST00000401179 91 ntBASIC27.2■■□□□ 1.94
RNF180Q86T96 PEMT-206ENST00000435340 960 ntTSL 5 BASIC27.2■■□□□ 1.94
RNF180Q86T96 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC27.2■■□□□ 1.94
RNF180Q86T96 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC27.19■■□□□ 1.94
RNF180Q86T96 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC27.19■■□□□ 1.94
RNF180Q86T96 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC27.19■■□□□ 1.94
RNF180Q86T96 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC27.19■■□□□ 1.94
RNF180Q86T96 PROC-203ENST00000409048 1586 ntTSL 5 BASIC27.18■■□□□ 1.94
RNF180Q86T96 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
RNF180Q86T96 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
RNF180Q86T96 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
RNF180Q86T96 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC27.18■■□□□ 1.94
RNF180Q86T96 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
RNF180Q86T96 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
RNF180Q86T96 KRT18P24-201ENST00000344739 1156 ntBASIC27.17■■□□□ 1.94
RNF180Q86T96 KRT16P3-201ENST00000439127 1283 ntBASIC27.17■■□□□ 1.94
RNF180Q86T96 UNC93B8-201ENST00000511903 705 ntBASIC27.17■■□□□ 1.94
RNF180Q86T96 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC27.17■■□□□ 1.94
RNF180Q86T96 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
RNF180Q86T96 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC27.17■■□□□ 1.94
RNF180Q86T96 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC27.17■■□□□ 1.94
RNF180Q86T96 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC27.16■■□□□ 1.94
RNF180Q86T96 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
RNF180Q86T96 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC27.16■■□□□ 1.94
RNF180Q86T96 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC27.16■■□□□ 1.94
RNF180Q86T96 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC27.15■■□□□ 1.94
RNF180Q86T96 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC27.15■■□□□ 1.94
RNF180Q86T96 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
RNF180Q86T96 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
RNF180Q86T96 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC27.15■■□□□ 1.94
RNF180Q86T96 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC27.14■■□□□ 1.94
RNF180Q86T96 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC27.14■■□□□ 1.94
RNF180Q86T96 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC27.14■■□□□ 1.94
RNF180Q86T96 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC27.14■■□□□ 1.94
RNF180Q86T96 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC27.14■■□□□ 1.94
RNF180Q86T96 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC27.14■■□□□ 1.94
RNF180Q86T96 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC27.14■■□□□ 1.93
RNF180Q86T96 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
RNF180Q86T96 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
RNF180Q86T96 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC27.13■■□□□ 1.93
RNF180Q86T96 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
RNF180Q86T96 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC27.13■■□□□ 1.93
RNF180Q86T96 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
RNF180Q86T96 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC27.12■■□□□ 1.93
RNF180Q86T96 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC27.12■■□□□ 1.93
RNF180Q86T96 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
RNF180Q86T96 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
RNF180Q86T96 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC27.12■■□□□ 1.93
RNF180Q86T96 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
RNF180Q86T96 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC27.11■■□□□ 1.93
RNF180Q86T96 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
RNF180Q86T96 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC27.1■■□□□ 1.93
RNF180Q86T96 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
RNF180Q86T96 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC27.1■■□□□ 1.93
RNF180Q86T96 AC137630.3-201ENST00000607245 391 ntBASIC27.1■■□□□ 1.93
RNF180Q86T96 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC27.1■■□□□ 1.93
RNF180Q86T96 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC27.09■■□□□ 1.93
RNF180Q86T96 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC27.08■■□□□ 1.93
RNF180Q86T96 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC27.07■■□□□ 1.92
RNF180Q86T96 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
RNF180Q86T96 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
RNF180Q86T96 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC27.06■■□□□ 1.92
RNF180Q86T96 TSPY9P-201ENST00000440215 945 ntBASIC27.06■■□□□ 1.92
RNF180Q86T96 TSPY11P-201ENST00000442607 1045 ntBASIC27.06■■□□□ 1.92
RNF180Q86T96 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC27.06■■□□□ 1.92
RNF180Q86T96 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC27.05■■□□□ 1.92
RNF180Q86T96 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
RNF180Q86T96 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
RNF180Q86T96 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
RNF180Q86T96 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC27.04■■□□□ 1.92
RNF180Q86T96 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC27.04■■□□□ 1.92
RNF180Q86T96 AC021242.3-201ENST00000607598 1377 ntBASIC27.04■■□□□ 1.92
RNF180Q86T96 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
RNF180Q86T96 AC120024.1-201ENST00000562672 995 ntBASIC27.03■■□□□ 1.92
RNF180Q86T96 AL449106.1-201ENST00000608517 1980 ntBASIC27.02■■□□□ 1.92
RNF180Q86T96 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC27.02■■□□□ 1.92
RNF180Q86T96 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC27.01■■□□□ 1.92
RNF180Q86T96 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
RNF180Q86T96 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
RNF180Q86T96 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
RNF180Q86T96 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC27.01■■□□□ 1.91
RNF180Q86T96 MIR638-201ENST00000385237 100 ntBASIC27.01■■□□□ 1.91
RNF180Q86T96 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC27.01■■□□□ 1.91
RNF180Q86T96 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC27.01■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms