Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.61■■□□□ 1.05
LRFN4Q6PJG9 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
LRFN4Q6PJG9 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
LRFN4Q6PJG9 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LRFN4Q6PJG9 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
LRFN4Q6PJG9 AC092296.2-201ENST00000589470 999 ntBASIC21.61■■□□□ 1.05
LRFN4Q6PJG9 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LRFN4Q6PJG9 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LRFN4Q6PJG9 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LRFN4Q6PJG9 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
LRFN4Q6PJG9 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.6■■□□□ 1.05
LRFN4Q6PJG9 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
LRFN4Q6PJG9 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
LRFN4Q6PJG9 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LRFN4Q6PJG9 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LRFN4Q6PJG9 AC092803.2-201ENST00000564287 1899 ntBASIC21.6■■□□□ 1.05
LRFN4Q6PJG9 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LRFN4Q6PJG9 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LRFN4Q6PJG9 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.59■■□□□ 1.05
LRFN4Q6PJG9 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
LRFN4Q6PJG9 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LRFN4Q6PJG9 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.58■■□□□ 1.05
LRFN4Q6PJG9 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
LRFN4Q6PJG9 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LRFN4Q6PJG9 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LRFN4Q6PJG9 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.04
LRFN4Q6PJG9 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
LRFN4Q6PJG9 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
LRFN4Q6PJG9 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
LRFN4Q6PJG9 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.58■■□□□ 1.04
LRFN4Q6PJG9 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
LRFN4Q6PJG9 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LRFN4Q6PJG9 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
LRFN4Q6PJG9 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.57■■□□□ 1.04
LRFN4Q6PJG9 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.57■■□□□ 1.04
LRFN4Q6PJG9 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LRFN4Q6PJG9 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.56■■□□□ 1.04
LRFN4Q6PJG9 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
LRFN4Q6PJG9 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LRFN4Q6PJG9 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LRFN4Q6PJG9 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
LRFN4Q6PJG9 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.55■■□□□ 1.04
LRFN4Q6PJG9 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LRFN4Q6PJG9 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRFN4Q6PJG9 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC21.55■■□□□ 1.04
LRFN4Q6PJG9 AC025884.2-201ENST00000553429 711 ntBASIC21.55■■□□□ 1.04
LRFN4Q6PJG9 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRFN4Q6PJG9 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.55■■□□□ 1.04
LRFN4Q6PJG9 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRFN4Q6PJG9 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.54■■□□□ 1.04
LRFN4Q6PJG9 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
LRFN4Q6PJG9 GPX1-201ENST00000419349 1106 ntBASIC21.54■■□□□ 1.04
LRFN4Q6PJG9 ECEL1P2-201ENST00000461596 1295 ntBASIC21.54■■□□□ 1.04
LRFN4Q6PJG9 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRFN4Q6PJG9 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.54■■□□□ 1.04
LRFN4Q6PJG9 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRFN4Q6PJG9 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRFN4Q6PJG9 SMPD5-203ENST00000639008 1464 ntBASIC21.53■■□□□ 1.04
LRFN4Q6PJG9 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
LRFN4Q6PJG9 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.53■■□□□ 1.04
LRFN4Q6PJG9 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
LRFN4Q6PJG9 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRFN4Q6PJG9 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRFN4Q6PJG9 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRFN4Q6PJG9 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
LRFN4Q6PJG9 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
LRFN4Q6PJG9 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
LRFN4Q6PJG9 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.52■■□□□ 1.04
LRFN4Q6PJG9 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
LRFN4Q6PJG9 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.52■■□□□ 1.03
LRFN4Q6PJG9 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
LRFN4Q6PJG9 DUSP8P4-201ENST00000399538 1761 ntBASIC21.51■■□□□ 1.03
LRFN4Q6PJG9 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.51■■□□□ 1.03
LRFN4Q6PJG9 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.51■■□□□ 1.03
LRFN4Q6PJG9 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.51■■□□□ 1.03
LRFN4Q6PJG9 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LRFN4Q6PJG9 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LRFN4Q6PJG9 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
LRFN4Q6PJG9 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LRFN4Q6PJG9 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LRFN4Q6PJG9 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRFN4Q6PJG9 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.5■■□□□ 1.03
LRFN4Q6PJG9 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.5■■□□□ 1.03
LRFN4Q6PJG9 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRFN4Q6PJG9 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LRFN4Q6PJG9 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRFN4Q6PJG9 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
LRFN4Q6PJG9 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LRFN4Q6PJG9 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.49■■□□□ 1.03
LRFN4Q6PJG9 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.49■■□□□ 1.03
LRFN4Q6PJG9 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LRFN4Q6PJG9 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.49■■□□□ 1.03
LRFN4Q6PJG9 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.49■■□□□ 1.03
LRFN4Q6PJG9 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.49■■□□□ 1.03
LRFN4Q6PJG9 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.49■■□□□ 1.03
LRFN4Q6PJG9 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LRFN4Q6PJG9 ERN1-208ENST00000606895 2068 ntBASIC21.49■■□□□ 1.03
LRFN4Q6PJG9 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LRFN4Q6PJG9 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.48■■□□□ 1.03
LRFN4Q6PJG9 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms