Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC144NLQ6NUI1 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC144NLQ6NUI1 RAP2CP1-202ENST00000605179 643 ntBASIC19.57■□□□□ 0.72
CCDC144NLQ6NUI1 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC144NLQ6NUI1 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC144NLQ6NUI1 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
CCDC144NLQ6NUI1 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
CCDC144NLQ6NUI1 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC144NLQ6NUI1 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.56■□□□□ 0.72
CCDC144NLQ6NUI1 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC144NLQ6NUI1 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC144NLQ6NUI1 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC144NLQ6NUI1 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC144NLQ6NUI1 AC009831.1-201ENST00000580420 1582 ntBASIC19.55■□□□□ 0.72
CCDC144NLQ6NUI1 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC144NLQ6NUI1 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC144NLQ6NUI1 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC144NLQ6NUI1 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC144NLQ6NUI1 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC144NLQ6NUI1 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC144NLQ6NUI1 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC144NLQ6NUI1 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CCDC144NLQ6NUI1 NTF6A-201ENST00000591175 560 ntBASIC19.54■□□□□ 0.72
CCDC144NLQ6NUI1 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC144NLQ6NUI1 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CCDC144NLQ6NUI1 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CCDC144NLQ6NUI1 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC144NLQ6NUI1 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC144NLQ6NUI1 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC144NLQ6NUI1 KRT18P10-201ENST00000388836 1287 ntBASIC19.53■□□□□ 0.72
CCDC144NLQ6NUI1 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC144NLQ6NUI1 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
CCDC144NLQ6NUI1 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC144NLQ6NUI1 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC144NLQ6NUI1 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC144NLQ6NUI1 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC19.53■□□□□ 0.72
CCDC144NLQ6NUI1 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC144NLQ6NUI1 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC144NLQ6NUI1 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC144NLQ6NUI1 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC144NLQ6NUI1 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC144NLQ6NUI1 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC144NLQ6NUI1 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CCDC144NLQ6NUI1 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.52■□□□□ 0.72
CCDC144NLQ6NUI1 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC144NLQ6NUI1 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CCDC144NLQ6NUI1 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC144NLQ6NUI1 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC144NLQ6NUI1 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.51■□□□□ 0.71
CCDC144NLQ6NUI1 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC144NLQ6NUI1 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC144NLQ6NUI1 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.5■□□□□ 0.71
CCDC144NLQ6NUI1 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC144NLQ6NUI1 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC144NLQ6NUI1 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC144NLQ6NUI1 U85056.1-201ENST00000616429 682 ntBASIC19.5■□□□□ 0.71
CCDC144NLQ6NUI1 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC144NLQ6NUI1 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC144NLQ6NUI1 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC144NLQ6NUI1 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CCDC144NLQ6NUI1 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC144NLQ6NUI1 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.49■□□□□ 0.71
CCDC144NLQ6NUI1 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC144NLQ6NUI1 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC144NLQ6NUI1 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.49■□□□□ 0.71
CCDC144NLQ6NUI1 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC144NLQ6NUI1 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.49■□□□□ 0.71
CCDC144NLQ6NUI1 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC144NLQ6NUI1 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CCDC144NLQ6NUI1 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC19.48■□□□□ 0.71
CCDC144NLQ6NUI1 AC092803.2-201ENST00000564287 1899 ntBASIC19.48■□□□□ 0.71
CCDC144NLQ6NUI1 CREM-210ENST00000374721 2020 ntTSL 5 BASIC19.48■□□□□ 0.71
CCDC144NLQ6NUI1 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC144NLQ6NUI1 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.48■□□□□ 0.71
CCDC144NLQ6NUI1 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC144NLQ6NUI1 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC144NLQ6NUI1 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC144NLQ6NUI1 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC144NLQ6NUI1 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC144NLQ6NUI1 AL592293.1-201ENST00000502889 1188 ntBASIC19.47■□□□□ 0.71
CCDC144NLQ6NUI1 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC144NLQ6NUI1 AC018755.3-202ENST00000596210 929 ntBASIC19.47■□□□□ 0.71
CCDC144NLQ6NUI1 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC144NLQ6NUI1 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC144NLQ6NUI1 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC144NLQ6NUI1 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC144NLQ6NUI1 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
CCDC144NLQ6NUI1 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC144NLQ6NUI1 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CCDC144NLQ6NUI1 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CCDC144NLQ6NUI1 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC144NLQ6NUI1 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC144NLQ6NUI1 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC144NLQ6NUI1 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC144NLQ6NUI1 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC144NLQ6NUI1 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CCDC144NLQ6NUI1 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC144NLQ6NUI1 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC144NLQ6NUI1 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC144NLQ6NUI1 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms