Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
PRICKLE4Q2TBC4 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
PRICKLE4Q2TBC4 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
PRICKLE4Q2TBC4 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PRICKLE4Q2TBC4 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
PRICKLE4Q2TBC4 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC22.63■■□□□ 1.21
PRICKLE4Q2TBC4 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.62■■□□□ 1.21
PRICKLE4Q2TBC4 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PRICKLE4Q2TBC4 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC22.62■■□□□ 1.21
PRICKLE4Q2TBC4 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
PRICKLE4Q2TBC4 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
PRICKLE4Q2TBC4 BRD4-212ENST00000630599 726 ntTSL 2 BASIC22.62■■□□□ 1.21
PRICKLE4Q2TBC4 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC22.62■■□□□ 1.21
PRICKLE4Q2TBC4 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PRICKLE4Q2TBC4 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
PRICKLE4Q2TBC4 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PRICKLE4Q2TBC4 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC22.61■■□□□ 1.21
PRICKLE4Q2TBC4 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC22.61■■□□□ 1.21
PRICKLE4Q2TBC4 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PRICKLE4Q2TBC4 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PRICKLE4Q2TBC4 AC010501.1-201ENST00000606270 1962 ntBASIC22.6■■□□□ 1.21
PRICKLE4Q2TBC4 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC22.6■■□□□ 1.21
PRICKLE4Q2TBC4 AC026202.3-201ENST00000600805 1127 ntBASIC22.6■■□□□ 1.21
PRICKLE4Q2TBC4 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PRICKLE4Q2TBC4 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC22.6■■□□□ 1.21
PRICKLE4Q2TBC4 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC22.59■■□□□ 1.21
PRICKLE4Q2TBC4 RAP2CP1-202ENST00000605179 643 ntBASIC22.59■■□□□ 1.21
PRICKLE4Q2TBC4 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PRICKLE4Q2TBC4 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
PRICKLE4Q2TBC4 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC22.59■■□□□ 1.21
PRICKLE4Q2TBC4 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PRICKLE4Q2TBC4 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PRICKLE4Q2TBC4 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC22.58■■□□□ 1.21
PRICKLE4Q2TBC4 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC22.58■■□□□ 1.21
PRICKLE4Q2TBC4 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PRICKLE4Q2TBC4 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC22.58■■□□□ 1.21
PRICKLE4Q2TBC4 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
PRICKLE4Q2TBC4 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PRICKLE4Q2TBC4 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PRICKLE4Q2TBC4 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
PRICKLE4Q2TBC4 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PRICKLE4Q2TBC4 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PRICKLE4Q2TBC4 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
PRICKLE4Q2TBC4 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC22.57■■□□□ 1.2
PRICKLE4Q2TBC4 SHF-207ENST00000560540 2062 ntTSL 5 BASIC22.57■■□□□ 1.2
PRICKLE4Q2TBC4 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
PRICKLE4Q2TBC4 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC22.56■■□□□ 1.2
PRICKLE4Q2TBC4 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC22.56■■□□□ 1.2
PRICKLE4Q2TBC4 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC22.56■■□□□ 1.2
PRICKLE4Q2TBC4 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
PRICKLE4Q2TBC4 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PRICKLE4Q2TBC4 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
PRICKLE4Q2TBC4 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
PRICKLE4Q2TBC4 AC009831.1-201ENST00000580420 1582 ntBASIC22.55■■□□□ 1.2
PRICKLE4Q2TBC4 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
PRICKLE4Q2TBC4 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PRICKLE4Q2TBC4 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PRICKLE4Q2TBC4 HYI-213ENST00000583037 1322 ntTSL 5 BASIC22.55■■□□□ 1.2
PRICKLE4Q2TBC4 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
PRICKLE4Q2TBC4 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PRICKLE4Q2TBC4 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PRICKLE4Q2TBC4 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PRICKLE4Q2TBC4 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PRICKLE4Q2TBC4 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PRICKLE4Q2TBC4 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PRICKLE4Q2TBC4 AC096887.2-201ENST00000623443 1957 ntBASIC22.53■■□□□ 1.2
PRICKLE4Q2TBC4 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PRICKLE4Q2TBC4 HES4-204ENST00000484667 667 ntTSL 3 BASIC22.53■■□□□ 1.2
PRICKLE4Q2TBC4 AC133552.2-201ENST00000619106 1032 ntBASIC22.53■■□□□ 1.2
PRICKLE4Q2TBC4 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PRICKLE4Q2TBC4 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC22.53■■□□□ 1.2
PRICKLE4Q2TBC4 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
PRICKLE4Q2TBC4 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PRICKLE4Q2TBC4 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC22.52■■□□□ 1.2
PRICKLE4Q2TBC4 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
PRICKLE4Q2TBC4 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
PRICKLE4Q2TBC4 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PRICKLE4Q2TBC4 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC22.51■■□□□ 1.19
PRICKLE4Q2TBC4 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PRICKLE4Q2TBC4 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PRICKLE4Q2TBC4 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PRICKLE4Q2TBC4 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
PRICKLE4Q2TBC4 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PRICKLE4Q2TBC4 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
PRICKLE4Q2TBC4 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PRICKLE4Q2TBC4 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PRICKLE4Q2TBC4 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PRICKLE4Q2TBC4 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PRICKLE4Q2TBC4 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
PRICKLE4Q2TBC4 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
PRICKLE4Q2TBC4 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC22.49■■□□□ 1.19
PRICKLE4Q2TBC4 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PRICKLE4Q2TBC4 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC22.49■■□□□ 1.19
PRICKLE4Q2TBC4 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PRICKLE4Q2TBC4 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PRICKLE4Q2TBC4 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC22.48■■□□□ 1.19
PRICKLE4Q2TBC4 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
PRICKLE4Q2TBC4 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
PRICKLE4Q2TBC4 ABHD17AP5-201ENST00000580133 923 ntBASIC22.48■■□□□ 1.19
PRICKLE4Q2TBC4 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms