Protein–RNA interactions for Protein: Q2M2D7

TBC1D28, TBC1 domain family member 28, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D28Q2M2D7 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TBC1D28Q2M2D7 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.02■□□□□ 0.96
TBC1D28Q2M2D7 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TBC1D28Q2M2D7 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TBC1D28Q2M2D7 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
TBC1D28Q2M2D7 AC009831.1-201ENST00000580420 1582 ntBASIC21.02■□□□□ 0.95
TBC1D28Q2M2D7 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TBC1D28Q2M2D7 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TBC1D28Q2M2D7 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
TBC1D28Q2M2D7 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
TBC1D28Q2M2D7 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
TBC1D28Q2M2D7 RAP2CP1-202ENST00000605179 643 ntBASIC21.01■□□□□ 0.95
TBC1D28Q2M2D7 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TBC1D28Q2M2D7 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21■□□□□ 0.95
TBC1D28Q2M2D7 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TBC1D28Q2M2D7 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21■□□□□ 0.95
TBC1D28Q2M2D7 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TBC1D28Q2M2D7 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TBC1D28Q2M2D7 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TBC1D28Q2M2D7 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TBC1D28Q2M2D7 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TBC1D28Q2M2D7 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TBC1D28Q2M2D7 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TBC1D28Q2M2D7 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.98■□□□□ 0.95
TBC1D28Q2M2D7 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.98■□□□□ 0.95
TBC1D28Q2M2D7 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
TBC1D28Q2M2D7 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TBC1D28Q2M2D7 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.98■□□□□ 0.95
TBC1D28Q2M2D7 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.97■□□□□ 0.95
TBC1D28Q2M2D7 AC092803.2-201ENST00000564287 1899 ntBASIC20.97■□□□□ 0.95
TBC1D28Q2M2D7 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.97■□□□□ 0.95
TBC1D28Q2M2D7 U85056.1-201ENST00000616429 682 ntBASIC20.97■□□□□ 0.95
TBC1D28Q2M2D7 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TBC1D28Q2M2D7 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TBC1D28Q2M2D7 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TBC1D28Q2M2D7 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TBC1D28Q2M2D7 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
TBC1D28Q2M2D7 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TBC1D28Q2M2D7 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
TBC1D28Q2M2D7 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
TBC1D28Q2M2D7 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TBC1D28Q2M2D7 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TBC1D28Q2M2D7 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TBC1D28Q2M2D7 NTF6A-201ENST00000591175 560 ntBASIC20.96■□□□□ 0.95
TBC1D28Q2M2D7 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
TBC1D28Q2M2D7 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.96■□□□□ 0.95
TBC1D28Q2M2D7 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.96■□□□□ 0.95
TBC1D28Q2M2D7 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.96■□□□□ 0.95
TBC1D28Q2M2D7 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TBC1D28Q2M2D7 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.96■□□□□ 0.95
TBC1D28Q2M2D7 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.96■□□□□ 0.95
TBC1D28Q2M2D7 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.95■□□□□ 0.94
TBC1D28Q2M2D7 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
TBC1D28Q2M2D7 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TBC1D28Q2M2D7 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.95■□□□□ 0.94
TBC1D28Q2M2D7 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.94■□□□□ 0.94
TBC1D28Q2M2D7 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TBC1D28Q2M2D7 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TBC1D28Q2M2D7 AL592293.1-201ENST00000502889 1188 ntBASIC20.94■□□□□ 0.94
TBC1D28Q2M2D7 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TBC1D28Q2M2D7 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.94■□□□□ 0.94
TBC1D28Q2M2D7 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TBC1D28Q2M2D7 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
TBC1D28Q2M2D7 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TBC1D28Q2M2D7 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TBC1D28Q2M2D7 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
TBC1D28Q2M2D7 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TBC1D28Q2M2D7 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TBC1D28Q2M2D7 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
TBC1D28Q2M2D7 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
TBC1D28Q2M2D7 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TBC1D28Q2M2D7 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.92■□□□□ 0.94
TBC1D28Q2M2D7 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TBC1D28Q2M2D7 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TBC1D28Q2M2D7 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.91■□□□□ 0.94
TBC1D28Q2M2D7 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TBC1D28Q2M2D7 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TBC1D28Q2M2D7 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.91■□□□□ 0.94
TBC1D28Q2M2D7 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.91■□□□□ 0.94
TBC1D28Q2M2D7 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TBC1D28Q2M2D7 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TBC1D28Q2M2D7 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
TBC1D28Q2M2D7 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
TBC1D28Q2M2D7 AC091060.1-201ENST00000623524 1766 ntBASIC20.9■□□□□ 0.94
TBC1D28Q2M2D7 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.9■□□□□ 0.94
TBC1D28Q2M2D7 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TBC1D28Q2M2D7 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TBC1D28Q2M2D7 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.9■□□□□ 0.94
TBC1D28Q2M2D7 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.9■□□□□ 0.94
TBC1D28Q2M2D7 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TBC1D28Q2M2D7 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TBC1D28Q2M2D7 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
TBC1D28Q2M2D7 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TBC1D28Q2M2D7 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TBC1D28Q2M2D7 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TBC1D28Q2M2D7 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TBC1D28Q2M2D7 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.88■□□□□ 0.93
TBC1D28Q2M2D7 AC145676.1-201ENST00000514988 2004 ntBASIC20.88■□□□□ 0.93
TBC1D28Q2M2D7 AC010501.1-201ENST00000606270 1962 ntBASIC20.88■□□□□ 0.93
TBC1D28Q2M2D7 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms