Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
CMC4P56277 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CMC4P56277 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC18.02■□□□□ 0.48
CMC4P56277 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CMC4P56277 U85056.1-201ENST00000616429 682 ntBASIC18.02■□□□□ 0.48
CMC4P56277 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
CMC4P56277 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
CMC4P56277 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC18.02■□□□□ 0.47
CMC4P56277 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CMC4P56277 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC18.01■□□□□ 0.47
CMC4P56277 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CMC4P56277 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CMC4P56277 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CMC4P56277 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CMC4P56277 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CMC4P56277 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC18■□□□□ 0.47
CMC4P56277 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CMC4P56277 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CMC4P56277 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC18■□□□□ 0.47
CMC4P56277 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CMC4P56277 AL592293.1-201ENST00000502889 1188 ntBASIC18■□□□□ 0.47
CMC4P56277 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CMC4P56277 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CMC4P56277 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CMC4P56277 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CMC4P56277 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CMC4P56277 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
CMC4P56277 HYI-210ENST00000486909 905 ntTSL 5 BASIC17.99■□□□□ 0.47
CMC4P56277 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CMC4P56277 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CMC4P56277 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
CMC4P56277 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CMC4P56277 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CMC4P56277 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CMC4P56277 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CMC4P56277 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CMC4P56277 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC17.98■□□□□ 0.47
CMC4P56277 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CMC4P56277 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CMC4P56277 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CMC4P56277 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CMC4P56277 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CMC4P56277 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CMC4P56277 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CMC4P56277 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CMC4P56277 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CMC4P56277 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CMC4P56277 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC17.96■□□□□ 0.47
CMC4P56277 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CMC4P56277 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CMC4P56277 AC012354.3-201ENST00000623734 483 ntBASIC17.96■□□□□ 0.47
CMC4P56277 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CMC4P56277 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CMC4P56277 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
CMC4P56277 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CMC4P56277 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CMC4P56277 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CMC4P56277 KRT18P60-201ENST00000312876 1297 ntBASIC17.95■□□□□ 0.46
CMC4P56277 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC17.95■□□□□ 0.46
CMC4P56277 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CMC4P56277 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CMC4P56277 MIR6765-201ENST00000614092 87 ntBASIC17.95■□□□□ 0.46
CMC4P56277 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CMC4P56277 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC17.95■□□□□ 0.46
CMC4P56277 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC17.95■□□□□ 0.46
CMC4P56277 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CMC4P56277 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC17.94■□□□□ 0.46
CMC4P56277 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CMC4P56277 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CMC4P56277 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CMC4P56277 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CMC4P56277 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CMC4P56277 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC17.93■□□□□ 0.46
CMC4P56277 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC17.93■□□□□ 0.46
CMC4P56277 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC17.93■□□□□ 0.46
CMC4P56277 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CMC4P56277 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CMC4P56277 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CMC4P56277 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC17.92■□□□□ 0.46
CMC4P56277 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CMC4P56277 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC17.92■□□□□ 0.46
CMC4P56277 AC129492.7-201ENST00000622992 756 ntBASIC17.92■□□□□ 0.46
CMC4P56277 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC17.92■□□□□ 0.46
CMC4P56277 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CMC4P56277 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CMC4P56277 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CMC4P56277 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC17.92■□□□□ 0.46
CMC4P56277 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
CMC4P56277 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC17.91■□□□□ 0.46
CMC4P56277 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CMC4P56277 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CMC4P56277 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CMC4P56277 IDNK-203ENST00000405990 629 ntTSL 2 BASIC17.91■□□□□ 0.46
CMC4P56277 AC074183.2-201ENST00000623112 922 ntBASIC17.91■□□□□ 0.46
CMC4P56277 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CMC4P56277 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CMC4P56277 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC17.9■□□□□ 0.46
CMC4P56277 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC17.9■□□□□ 0.46
CMC4P56277 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC17.9■□□□□ 0.46
CMC4P56277 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 148.1 ms