Protein–RNA interactions for Protein: P50748

KNTC1, Kinetochore-associated protein 1, humanhuman

Predictions only

Length 2,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1P50748 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC23.29■■□□□ 1.32
KNTC1P50748 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
KNTC1P50748 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
KNTC1P50748 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC23.29■■□□□ 1.32
KNTC1P50748 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.29■■□□□ 1.32
KNTC1P50748 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
KNTC1P50748 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.28■■□□□ 1.32
KNTC1P50748 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC23.28■■□□□ 1.32
KNTC1P50748 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
KNTC1P50748 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
KNTC1P50748 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
KNTC1P50748 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
KNTC1P50748 KRT16P3-201ENST00000439127 1283 ntBASIC23.27■■□□□ 1.32
KNTC1P50748 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
KNTC1P50748 KRT18P24-201ENST00000344739 1156 ntBASIC23.27■■□□□ 1.31
KNTC1P50748 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.31
KNTC1P50748 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.31
KNTC1P50748 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.27■■□□□ 1.31
KNTC1P50748 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC23.26■■□□□ 1.31
KNTC1P50748 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
KNTC1P50748 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
KNTC1P50748 LONRF2P2-201ENST00000439212 571 ntBASIC23.26■■□□□ 1.31
KNTC1P50748 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.26■■□□□ 1.31
KNTC1P50748 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
KNTC1P50748 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.26■■□□□ 1.31
KNTC1P50748 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
KNTC1P50748 KRT18P10-201ENST00000388836 1287 ntBASIC23.25■■□□□ 1.31
KNTC1P50748 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
KNTC1P50748 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
KNTC1P50748 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.25■■□□□ 1.31
KNTC1P50748 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
KNTC1P50748 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
KNTC1P50748 AC137630.3-201ENST00000607245 391 ntBASIC23.25■■□□□ 1.31
KNTC1P50748 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
KNTC1P50748 ABCB10P1-201ENST00000614297 2181 ntBASIC23.24■■□□□ 1.31
KNTC1P50748 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
KNTC1P50748 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
KNTC1P50748 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
KNTC1P50748 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC23.23■■□□□ 1.31
KNTC1P50748 AC110285.6-201ENST00000617652 491 ntBASIC23.23■■□□□ 1.31
KNTC1P50748 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
KNTC1P50748 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
KNTC1P50748 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
KNTC1P50748 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.21■■□□□ 1.31
KNTC1P50748 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
KNTC1P50748 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC23.21■■□□□ 1.31
KNTC1P50748 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
KNTC1P50748 MIR3621-201ENST00000580529 85 ntBASIC23.21■■□□□ 1.31
KNTC1P50748 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
KNTC1P50748 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.2■■□□□ 1.3
KNTC1P50748 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC23.2■■□□□ 1.3
KNTC1P50748 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
KNTC1P50748 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC23.19■■□□□ 1.3
KNTC1P50748 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
KNTC1P50748 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
KNTC1P50748 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
KNTC1P50748 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
KNTC1P50748 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC23.18■■□□□ 1.3
KNTC1P50748 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.18■■□□□ 1.3
KNTC1P50748 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.18■■□□□ 1.3
KNTC1P50748 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.18■■□□□ 1.3
KNTC1P50748 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
KNTC1P50748 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
KNTC1P50748 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC23.17■■□□□ 1.3
KNTC1P50748 AC092028.1-203ENST00000608262 953 ntBASIC23.17■■□□□ 1.3
KNTC1P50748 RALB-208ENST00000631312 311 ntTSL 5 BASIC23.17■■□□□ 1.3
KNTC1P50748 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
KNTC1P50748 NALT1-201ENST00000429224 738 ntTSL 5 BASIC23.17■■□□□ 1.3
KNTC1P50748 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC23.17■■□□□ 1.3
KNTC1P50748 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC23.17■■□□□ 1.3
KNTC1P50748 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.16■■□□□ 1.3
KNTC1P50748 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC23.16■■□□□ 1.3
KNTC1P50748 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
KNTC1P50748 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.16■■□□□ 1.3
KNTC1P50748 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
KNTC1P50748 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
KNTC1P50748 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
KNTC1P50748 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.16■■□□□ 1.3
KNTC1P50748 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
KNTC1P50748 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
KNTC1P50748 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
KNTC1P50748 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC23.15■■□□□ 1.3
KNTC1P50748 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
KNTC1P50748 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.15■■□□□ 1.3
KNTC1P50748 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC23.15■■□□□ 1.3
KNTC1P50748 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.15■■□□□ 1.3
KNTC1P50748 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC23.14■■□□□ 1.3
KNTC1P50748 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC23.14■■□□□ 1.3
KNTC1P50748 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
KNTC1P50748 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
KNTC1P50748 AL139246.5-201ENST00000606645 996 ntBASIC23.13■■□□□ 1.29
KNTC1P50748 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC23.13■■□□□ 1.29
KNTC1P50748 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
KNTC1P50748 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
KNTC1P50748 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
KNTC1P50748 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
KNTC1P50748 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
KNTC1P50748 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
KNTC1P50748 AC021242.3-201ENST00000607598 1377 ntBASIC23.12■■□□□ 1.29
KNTC1P50748 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms