Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 LINC00543-201ENST00000567234 1845 ntBASIC19.7■□□□□ 0.74
SNCAP37840 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
SNCAP37840 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
SNCAP37840 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC19.7■□□□□ 0.74
SNCAP37840 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNCAP37840 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
SNCAP37840 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.7■□□□□ 0.74
SNCAP37840 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SNCAP37840 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.69■□□□□ 0.74
SNCAP37840 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC19.69■□□□□ 0.74
SNCAP37840 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNCAP37840 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
SNCAP37840 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.69■□□□□ 0.74
SNCAP37840 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SNCAP37840 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNCAP37840 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNCAP37840 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
SNCAP37840 DUX4L29-201ENST00000425409 679 ntBASIC19.68■□□□□ 0.74
SNCAP37840 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNCAP37840 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
SNCAP37840 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
SNCAP37840 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNCAP37840 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SNCAP37840 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNCAP37840 PEX7-203ENST00000541292 945 ntTSL 5 BASIC19.67■□□□□ 0.74
SNCAP37840 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SNCAP37840 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC19.67■□□□□ 0.74
SNCAP37840 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.67■□□□□ 0.74
SNCAP37840 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNCAP37840 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNCAP37840 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNCAP37840 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SNCAP37840 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SNCAP37840 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.66■□□□□ 0.74
SNCAP37840 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
SNCAP37840 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SNCAP37840 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC19.66■□□□□ 0.74
SNCAP37840 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNCAP37840 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNCAP37840 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNCAP37840 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
SNCAP37840 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC19.65■□□□□ 0.74
SNCAP37840 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC19.65■□□□□ 0.74
SNCAP37840 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC19.65■□□□□ 0.74
SNCAP37840 AC021231.2-201ENST00000594613 730 ntBASIC19.65■□□□□ 0.74
SNCAP37840 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.65■□□□□ 0.74
SNCAP37840 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNCAP37840 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNCAP37840 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNCAP37840 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.65■□□□□ 0.74
SNCAP37840 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
SNCAP37840 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SNCAP37840 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SNCAP37840 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC19.64■□□□□ 0.73
SNCAP37840 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SNCAP37840 WHAMMP3-201ENST00000611636 1609 ntBASIC19.64■□□□□ 0.73
SNCAP37840 AC142381.3-201ENST00000568208 1670 ntBASIC19.64■□□□□ 0.73
SNCAP37840 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SNCAP37840 AC079834.2-201ENST00000609776 1949 ntBASIC19.64■□□□□ 0.73
SNCAP37840 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNCAP37840 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
SNCAP37840 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SNCAP37840 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SNCAP37840 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNCAP37840 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNCAP37840 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNCAP37840 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNCAP37840 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SNCAP37840 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNCAP37840 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SNCAP37840 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.62■□□□□ 0.73
SNCAP37840 AL139125.2-201ENST00000623134 1869 ntBASIC19.62■□□□□ 0.73
SNCAP37840 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNCAP37840 AC142472.1-201ENST00000612013 1741 ntBASIC19.62■□□□□ 0.73
SNCAP37840 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNCAP37840 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC19.61■□□□□ 0.73
SNCAP37840 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.61■□□□□ 0.73
SNCAP37840 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNCAP37840 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNCAP37840 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SNCAP37840 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNCAP37840 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNCAP37840 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SNCAP37840 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SNCAP37840 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SNCAP37840 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SNCAP37840 AC068473.5-201ENST00000616428 2072 ntBASIC19.6■□□□□ 0.73
SNCAP37840 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.59■□□□□ 0.73
SNCAP37840 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC19.59■□□□□ 0.73
SNCAP37840 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SNCAP37840 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNCAP37840 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNCAP37840 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNCAP37840 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNCAP37840 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SNCAP37840 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
SNCAP37840 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
SNCAP37840 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SNCAP37840 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SNCAP37840 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms