Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
LMO1P25800 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LMO1P25800 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
LMO1P25800 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
LMO1P25800 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.36■□□□□ 0.85
LMO1P25800 AC010501.1-201ENST00000606270 1962 ntBASIC20.35■□□□□ 0.85
LMO1P25800 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LMO1P25800 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LMO1P25800 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.35■□□□□ 0.85
LMO1P25800 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.35■□□□□ 0.85
LMO1P25800 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
LMO1P25800 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
LMO1P25800 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
LMO1P25800 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LMO1P25800 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LMO1P25800 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
LMO1P25800 AC060814.1-201ENST00000554326 538 ntBASIC20.34■□□□□ 0.85
LMO1P25800 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LMO1P25800 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.34■□□□□ 0.85
LMO1P25800 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LMO1P25800 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.34■□□□□ 0.85
LMO1P25800 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.34■□□□□ 0.85
LMO1P25800 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LMO1P25800 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LMO1P25800 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LMO1P25800 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.33■□□□□ 0.85
LMO1P25800 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LMO1P25800 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
LMO1P25800 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.33■□□□□ 0.84
LMO1P25800 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.32■□□□□ 0.84
LMO1P25800 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LMO1P25800 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.32■□□□□ 0.84
LMO1P25800 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LMO1P25800 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
LMO1P25800 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LMO1P25800 ERN1-208ENST00000606895 2068 ntBASIC20.31■□□□□ 0.84
LMO1P25800 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LMO1P25800 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LMO1P25800 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.31■□□□□ 0.84
LMO1P25800 AL157400.5-201ENST00000507624 621 ntBASIC20.31■□□□□ 0.84
LMO1P25800 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.31■□□□□ 0.84
LMO1P25800 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.31■□□□□ 0.84
LMO1P25800 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
LMO1P25800 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LMO1P25800 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
LMO1P25800 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.3■□□□□ 0.84
LMO1P25800 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LMO1P25800 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LMO1P25800 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LMO1P25800 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LMO1P25800 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.29■□□□□ 0.84
LMO1P25800 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LMO1P25800 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
LMO1P25800 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.29■□□□□ 0.84
LMO1P25800 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LMO1P25800 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.29■□□□□ 0.84
LMO1P25800 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.29■□□□□ 0.84
LMO1P25800 AC025884.2-201ENST00000553429 711 ntBASIC20.29■□□□□ 0.84
LMO1P25800 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LMO1P25800 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
LMO1P25800 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LMO1P25800 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LMO1P25800 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LMO1P25800 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.28■□□□□ 0.84
LMO1P25800 MIR4449-201ENST00000578365 66 ntBASIC20.28■□□□□ 0.84
LMO1P25800 AC092296.2-201ENST00000589470 999 ntBASIC20.28■□□□□ 0.84
LMO1P25800 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LMO1P25800 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.28■□□□□ 0.84
LMO1P25800 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
LMO1P25800 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
LMO1P25800 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LMO1P25800 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.27■□□□□ 0.84
LMO1P25800 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.27■□□□□ 0.84
LMO1P25800 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LMO1P25800 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LMO1P25800 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
LMO1P25800 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.25■□□□□ 0.83
LMO1P25800 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LMO1P25800 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LMO1P25800 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
LMO1P25800 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
LMO1P25800 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LMO1P25800 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
LMO1P25800 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
LMO1P25800 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LMO1P25800 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LMO1P25800 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
LMO1P25800 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
LMO1P25800 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LMO1P25800 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.24■□□□□ 0.83
LMO1P25800 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.24■□□□□ 0.83
LMO1P25800 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.23■□□□□ 0.83
LMO1P25800 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
LMO1P25800 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.23■□□□□ 0.83
LMO1P25800 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
LMO1P25800 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LMO1P25800 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LMO1P25800 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LMO1P25800 ECEL1P2-201ENST00000461596 1295 ntBASIC20.23■□□□□ 0.83
LMO1P25800 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms