Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
COL11A2P13942 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
COL11A2P13942 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
COL11A2P13942 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
COL11A2P13942 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
COL11A2P13942 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
COL11A2P13942 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
COL11A2P13942 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
COL11A2P13942 AC131281.2-201ENST00000520478 145 ntBASIC30.33■■■□□ 2.45
COL11A2P13942 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC30.33■■■□□ 2.45
COL11A2P13942 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC30.33■■■□□ 2.45
COL11A2P13942 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC30.33■■■□□ 2.45
COL11A2P13942 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC30.33■■■□□ 2.45
COL11A2P13942 MIR638-201ENST00000385237 100 ntBASIC30.32■■■□□ 2.44
COL11A2P13942 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC30.31■■■□□ 2.44
COL11A2P13942 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC30.31■■■□□ 2.44
COL11A2P13942 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
COL11A2P13942 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC30.3■■■□□ 2.44
COL11A2P13942 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
COL11A2P13942 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
COL11A2P13942 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
COL11A2P13942 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC30.29■■■□□ 2.44
COL11A2P13942 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC30.29■■■□□ 2.44
COL11A2P13942 KRT125P-201ENST00000546827 989 ntBASIC30.28■■■□□ 2.44
COL11A2P13942 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
COL11A2P13942 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC30.28■■■□□ 2.44
COL11A2P13942 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC30.28■■■□□ 2.44
COL11A2P13942 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC30.27■■■□□ 2.44
COL11A2P13942 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC30.27■■■□□ 2.44
COL11A2P13942 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
COL11A2P13942 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
COL11A2P13942 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC30.25■■■□□ 2.43
COL11A2P13942 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
COL11A2P13942 PEMT-206ENST00000435340 960 ntTSL 5 BASIC30.25■■■□□ 2.43
COL11A2P13942 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC30.25■■■□□ 2.43
COL11A2P13942 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC30.24■■■□□ 2.43
COL11A2P13942 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC30.24■■■□□ 2.43
COL11A2P13942 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC30.23■■■□□ 2.43
COL11A2P13942 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
COL11A2P13942 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC30.23■■■□□ 2.43
COL11A2P13942 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC30.23■■■□□ 2.43
COL11A2P13942 AC022616.5-201ENST00000518796 181 ntBASIC30.22■■■□□ 2.43
COL11A2P13942 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
COL11A2P13942 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC30.22■■■□□ 2.43
COL11A2P13942 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC30.22■■■□□ 2.43
COL11A2P13942 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC30.22■■■□□ 2.43
COL11A2P13942 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
COL11A2P13942 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
COL11A2P13942 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC30.2■■■□□ 2.43
COL11A2P13942 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
COL11A2P13942 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
COL11A2P13942 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
COL11A2P13942 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC30.19■■■□□ 2.42
COL11A2P13942 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC30.19■■■□□ 2.42
COL11A2P13942 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC30.19■■■□□ 2.42
COL11A2P13942 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC30.19■■■□□ 2.42
COL11A2P13942 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC30.19■■■□□ 2.42
COL11A2P13942 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC30.19■■■□□ 2.42
COL11A2P13942 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
COL11A2P13942 TRIR-202ENST00000588213 841 ntTSL 3 BASIC30.18■■■□□ 2.42
COL11A2P13942 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
COL11A2P13942 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
COL11A2P13942 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
COL11A2P13942 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC30.17■■■□□ 2.42
COL11A2P13942 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC30.17■■■□□ 2.42
COL11A2P13942 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC30.17■■■□□ 2.42
COL11A2P13942 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
COL11A2P13942 PROC-203ENST00000409048 1586 ntTSL 5 BASIC30.16■■■□□ 2.42
COL11A2P13942 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC30.16■■■□□ 2.42
COL11A2P13942 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
COL11A2P13942 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC30.16■■■□□ 2.42
COL11A2P13942 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
COL11A2P13942 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC30.16■■■□□ 2.42
COL11A2P13942 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
COL11A2P13942 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
COL11A2P13942 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
COL11A2P13942 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC30.15■■■□□ 2.42
COL11A2P13942 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
COL11A2P13942 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
COL11A2P13942 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC30.15■■■□□ 2.42
COL11A2P13942 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC30.15■■■□□ 2.42
COL11A2P13942 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC30.14■■■□□ 2.42
COL11A2P13942 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC30.14■■■□□ 2.42
COL11A2P13942 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC30.14■■■□□ 2.42
COL11A2P13942 MIR4281-201ENST00000580852 62 ntBASIC30.14■■■□□ 2.42
COL11A2P13942 AC137630.3-201ENST00000607245 391 ntBASIC30.14■■■□□ 2.42
COL11A2P13942 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC30.13■■■□□ 2.41
COL11A2P13942 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
COL11A2P13942 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC30.13■■■□□ 2.41
COL11A2P13942 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
COL11A2P13942 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
COL11A2P13942 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC30.13■■■□□ 2.41
COL11A2P13942 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC30.12■■■□□ 2.41
COL11A2P13942 AC021242.3-201ENST00000607598 1377 ntBASIC30.12■■■□□ 2.41
COL11A2P13942 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
COL11A2P13942 KRT18P24-201ENST00000344739 1156 ntBASIC30.12■■■□□ 2.41
COL11A2P13942 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
COL11A2P13942 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC30.12■■■□□ 2.41
COL11A2P13942 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC30.11■■■□□ 2.41
COL11A2P13942 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms