Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMIM17P0DL12 CIB2-204ENST00000557846 934 ntTSL 3 BASIC17.82■□□□□ 0.44
SMIM17P0DL12 CALM3-209ENST00000597743 577 ntTSL 4 BASIC17.82■□□□□ 0.44
SMIM17P0DL12 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMIM17P0DL12 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMIM17P0DL12 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMIM17P0DL12 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMIM17P0DL12 AC142472.1-201ENST00000612013 1741 ntBASIC17.81■□□□□ 0.44
SMIM17P0DL12 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMIM17P0DL12 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC17.81■□□□□ 0.44
SMIM17P0DL12 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMIM17P0DL12 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMIM17P0DL12 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SMIM17P0DL12 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMIM17P0DL12 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SMIM17P0DL12 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMIM17P0DL12 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
SMIM17P0DL12 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC17.81■□□□□ 0.44
SMIM17P0DL12 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMIM17P0DL12 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMIM17P0DL12 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMIM17P0DL12 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMIM17P0DL12 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMIM17P0DL12 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.8■□□□□ 0.44
SMIM17P0DL12 MIR3665-201ENST00000578708 105 ntBASIC17.8■□□□□ 0.44
SMIM17P0DL12 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMIM17P0DL12 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
SMIM17P0DL12 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SMIM17P0DL12 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMIM17P0DL12 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMIM17P0DL12 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMIM17P0DL12 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
SMIM17P0DL12 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC17.79■□□□□ 0.44
SMIM17P0DL12 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC17.79■□□□□ 0.44
SMIM17P0DL12 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMIM17P0DL12 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SMIM17P0DL12 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SMIM17P0DL12 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMIM17P0DL12 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
SMIM17P0DL12 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.78■□□□□ 0.44
SMIM17P0DL12 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SMIM17P0DL12 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMIM17P0DL12 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC17.78■□□□□ 0.44
SMIM17P0DL12 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC17.78■□□□□ 0.44
SMIM17P0DL12 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC17.78■□□□□ 0.44
SMIM17P0DL12 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
SMIM17P0DL12 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMIM17P0DL12 AC110285.7-201ENST00000624417 1536 ntBASIC17.77■□□□□ 0.44
SMIM17P0DL12 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC17.77■□□□□ 0.44
SMIM17P0DL12 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SMIM17P0DL12 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SMIM17P0DL12 WHAMMP3-201ENST00000611636 1609 ntBASIC17.77■□□□□ 0.44
SMIM17P0DL12 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SMIM17P0DL12 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
SMIM17P0DL12 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC17.77■□□□□ 0.44
SMIM17P0DL12 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SMIM17P0DL12 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SMIM17P0DL12 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC17.77■□□□□ 0.43
SMIM17P0DL12 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SMIM17P0DL12 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SMIM17P0DL12 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMIM17P0DL12 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SMIM17P0DL12 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SMIM17P0DL12 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC17.76■□□□□ 0.43
SMIM17P0DL12 DUX4L28-201ENST00000623687 678 ntBASIC17.76■□□□□ 0.43
SMIM17P0DL12 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SMIM17P0DL12 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC17.76■□□□□ 0.43
SMIM17P0DL12 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMIM17P0DL12 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMIM17P0DL12 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMIM17P0DL12 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
SMIM17P0DL12 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMIM17P0DL12 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMIM17P0DL12 THRA-202ENST00000394121 2260 ntTSL 2 BASIC17.75■□□□□ 0.43
SMIM17P0DL12 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SMIM17P0DL12 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SMIM17P0DL12 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMIM17P0DL12 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC17.74■□□□□ 0.43
SMIM17P0DL12 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMIM17P0DL12 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC17.74■□□□□ 0.43
SMIM17P0DL12 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SMIM17P0DL12 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SMIM17P0DL12 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMIM17P0DL12 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMIM17P0DL12 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC17.73■□□□□ 0.43
SMIM17P0DL12 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMIM17P0DL12 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC17.73■□□□□ 0.43
SMIM17P0DL12 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SMIM17P0DL12 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMIM17P0DL12 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.73■□□□□ 0.43
SMIM17P0DL12 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SMIM17P0DL12 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SMIM17P0DL12 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SMIM17P0DL12 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMIM17P0DL12 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SMIM17P0DL12 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SMIM17P0DL12 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMIM17P0DL12 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
SMIM17P0DL12 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMIM17P0DL12 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms