Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC32.64■■■□□ 2.82
COL5A2P05997 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC32.64■■■□□ 2.82
COL5A2P05997 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
COL5A2P05997 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC32.63■■■□□ 2.81
COL5A2P05997 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
COL5A2P05997 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
COL5A2P05997 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC32.62■■■□□ 2.81
COL5A2P05997 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC32.62■■■□□ 2.81
COL5A2P05997 KRT16P3-201ENST00000439127 1283 ntBASIC32.62■■■□□ 2.81
COL5A2P05997 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
COL5A2P05997 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC32.61■■■□□ 2.81
COL5A2P05997 MIR638-201ENST00000385237 100 ntBASIC32.61■■■□□ 2.81
COL5A2P05997 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC32.61■■■□□ 2.81
COL5A2P05997 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC32.61■■■□□ 2.81
COL5A2P05997 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC32.6■■■□□ 2.81
COL5A2P05997 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
COL5A2P05997 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC32.59■■■□□ 2.81
COL5A2P05997 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC32.59■■■□□ 2.81
COL5A2P05997 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
COL5A2P05997 AC022616.5-201ENST00000518796 181 ntBASIC32.57■■■□□ 2.8
COL5A2P05997 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC32.57■■■□□ 2.8
COL5A2P05997 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
COL5A2P05997 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC32.56■■■□□ 2.8
COL5A2P05997 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC32.56■■■□□ 2.8
COL5A2P05997 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC32.55■■■□□ 2.8
COL5A2P05997 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC32.55■■■□□ 2.8
COL5A2P05997 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC32.55■■■□□ 2.8
COL5A2P05997 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
COL5A2P05997 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
COL5A2P05997 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC32.55■■■□□ 2.8
COL5A2P05997 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC32.54■■■□□ 2.8
COL5A2P05997 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC32.54■■■□□ 2.8
COL5A2P05997 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
COL5A2P05997 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC32.54■■■□□ 2.8
COL5A2P05997 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC32.53■■■□□ 2.8
COL5A2P05997 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC32.53■■■□□ 2.8
COL5A2P05997 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC32.53■■■□□ 2.8
COL5A2P05997 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
COL5A2P05997 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC32.52■■■□□ 2.8
COL5A2P05997 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
COL5A2P05997 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
COL5A2P05997 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC32.52■■■□□ 2.8
COL5A2P05997 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC32.51■■■□□ 2.8
COL5A2P05997 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC32.51■■■□□ 2.79
COL5A2P05997 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC32.51■■■□□ 2.79
COL5A2P05997 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC32.5■■■□□ 2.79
COL5A2P05997 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
COL5A2P05997 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
COL5A2P05997 KRT18P24-201ENST00000344739 1156 ntBASIC32.49■■■□□ 2.79
COL5A2P05997 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC32.49■■■□□ 2.79
COL5A2P05997 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
COL5A2P05997 AC131281.2-201ENST00000520478 145 ntBASIC32.48■■■□□ 2.79
COL5A2P05997 AC137630.3-201ENST00000607245 391 ntBASIC32.48■■■□□ 2.79
COL5A2P05997 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC32.48■■■□□ 2.79
COL5A2P05997 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC32.48■■■□□ 2.79
COL5A2P05997 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC32.48■■■□□ 2.79
COL5A2P05997 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC32.48■■■□□ 2.79
COL5A2P05997 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
COL5A2P05997 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC32.47■■■□□ 2.79
COL5A2P05997 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC32.47■■■□□ 2.79
COL5A2P05997 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC32.46■■■□□ 2.79
COL5A2P05997 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC32.46■■■□□ 2.79
COL5A2P05997 AC021242.3-201ENST00000607598 1377 ntBASIC32.46■■■□□ 2.79
COL5A2P05997 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
COL5A2P05997 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC32.45■■■□□ 2.79
COL5A2P05997 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC32.45■■■□□ 2.79
COL5A2P05997 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC32.44■■■□□ 2.78
COL5A2P05997 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
COL5A2P05997 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
COL5A2P05997 PROC-203ENST00000409048 1586 ntTSL 5 BASIC32.44■■■□□ 2.78
COL5A2P05997 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC32.44■■■□□ 2.78
COL5A2P05997 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
COL5A2P05997 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
COL5A2P05997 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
COL5A2P05997 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
COL5A2P05997 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
COL5A2P05997 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
COL5A2P05997 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
COL5A2P05997 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
COL5A2P05997 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC32.42■■■□□ 2.78
COL5A2P05997 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC32.42■■■□□ 2.78
COL5A2P05997 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC32.42■■■□□ 2.78
COL5A2P05997 TSPY9P-201ENST00000440215 945 ntBASIC32.42■■■□□ 2.78
COL5A2P05997 TSPY11P-201ENST00000442607 1045 ntBASIC32.42■■■□□ 2.78
COL5A2P05997 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC32.42■■■□□ 2.78
COL5A2P05997 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC32.42■■■□□ 2.78
COL5A2P05997 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
COL5A2P05997 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC32.41■■■□□ 2.78
COL5A2P05997 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
COL5A2P05997 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
COL5A2P05997 TRIR-202ENST00000588213 841 ntTSL 3 BASIC32.41■■■□□ 2.78
COL5A2P05997 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC32.41■■■□□ 2.78
COL5A2P05997 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC32.41■■■□□ 2.78
COL5A2P05997 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
COL5A2P05997 KRT18P10-201ENST00000388836 1287 ntBASIC32.39■■■□□ 2.78
COL5A2P05997 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC32.39■■■□□ 2.78
COL5A2P05997 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
COL5A2P05997 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC32.39■■■□□ 2.78
COL5A2P05997 AL139246.5-201ENST00000606645 996 ntBASIC32.39■■■□□ 2.78
COL5A2P05997 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC32.39■■■□□ 2.78
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms