Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC23.35■■□□□ 1.33
KRT6AP02538 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.35■■□□□ 1.33
KRT6AP02538 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
KRT6AP02538 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
KRT6AP02538 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
KRT6AP02538 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
KRT6AP02538 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC23.35■■□□□ 1.33
KRT6AP02538 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.35■■□□□ 1.33
KRT6AP02538 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
KRT6AP02538 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
KRT6AP02538 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC23.34■■□□□ 1.33
KRT6AP02538 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
KRT6AP02538 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC23.32■■□□□ 1.32
KRT6AP02538 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
KRT6AP02538 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
KRT6AP02538 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
KRT6AP02538 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
KRT6AP02538 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
KRT6AP02538 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
KRT6AP02538 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
KRT6AP02538 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
KRT6AP02538 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.3■■□□□ 1.32
KRT6AP02538 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
KRT6AP02538 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
KRT6AP02538 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC23.3■■□□□ 1.32
KRT6AP02538 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC23.3■■□□□ 1.32
KRT6AP02538 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
KRT6AP02538 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
KRT6AP02538 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
KRT6AP02538 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
KRT6AP02538 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
KRT6AP02538 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
KRT6AP02538 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC23.29■■□□□ 1.32
KRT6AP02538 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
KRT6AP02538 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
KRT6AP02538 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
KRT6AP02538 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.28■■□□□ 1.32
KRT6AP02538 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.28■■□□□ 1.32
KRT6AP02538 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23.28■■□□□ 1.32
KRT6AP02538 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
KRT6AP02538 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
KRT6AP02538 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
KRT6AP02538 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
KRT6AP02538 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
KRT6AP02538 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
KRT6AP02538 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
KRT6AP02538 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
KRT6AP02538 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
KRT6AP02538 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
KRT6AP02538 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
KRT6AP02538 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
KRT6AP02538 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
KRT6AP02538 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
KRT6AP02538 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
KRT6AP02538 AC096887.2-201ENST00000623443 1957 ntBASIC23.27■■□□□ 1.32
KRT6AP02538 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
KRT6AP02538 PVT1-219ENST00000523427 938 ntTSL 3 BASIC23.27■■□□□ 1.32
KRT6AP02538 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
KRT6AP02538 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
KRT6AP02538 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.26■■□□□ 1.31
KRT6AP02538 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.26■■□□□ 1.31
KRT6AP02538 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
KRT6AP02538 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.26■■□□□ 1.31
KRT6AP02538 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.26■■□□□ 1.31
KRT6AP02538 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
KRT6AP02538 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.26■■□□□ 1.31
KRT6AP02538 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
KRT6AP02538 MIR639-201ENST00000384974 98 ntBASIC23.25■■□□□ 1.31
KRT6AP02538 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
KRT6AP02538 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.25■■□□□ 1.31
KRT6AP02538 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC23.25■■□□□ 1.31
KRT6AP02538 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
KRT6AP02538 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
KRT6AP02538 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
KRT6AP02538 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
KRT6AP02538 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
KRT6AP02538 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.23■■□□□ 1.31
KRT6AP02538 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
KRT6AP02538 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
KRT6AP02538 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.23■■□□□ 1.31
KRT6AP02538 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
KRT6AP02538 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
KRT6AP02538 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.23■■□□□ 1.31
KRT6AP02538 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC23.23■■□□□ 1.31
KRT6AP02538 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC23.23■■□□□ 1.31
KRT6AP02538 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
KRT6AP02538 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.22■■□□□ 1.31
KRT6AP02538 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.22■■□□□ 1.31
KRT6AP02538 TPT1-202ENST00000379055 948 ntTSL 2 BASIC23.22■■□□□ 1.31
KRT6AP02538 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
KRT6AP02538 AC060814.1-201ENST00000554326 538 ntBASIC23.22■■□□□ 1.31
KRT6AP02538 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC23.22■■□□□ 1.31
KRT6AP02538 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC23.22■■□□□ 1.31
KRT6AP02538 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC23.22■■□□□ 1.31
KRT6AP02538 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
KRT6AP02538 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
KRT6AP02538 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
KRT6AP02538 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
KRT6AP02538 AL157400.5-201ENST00000507624 621 ntBASIC23.21■■□□□ 1.31
KRT6AP02538 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.21■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms