Protein–RNA interactions for Protein: P00414

MT-CO3, Cytochrome c oxidase subunit 3, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO3P00414 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
MT-CO3P00414 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
MT-CO3P00414 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC23.29■■□□□ 1.32
MT-CO3P00414 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
MT-CO3P00414 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
MT-CO3P00414 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.29■■□□□ 1.32
MT-CO3P00414 AC022616.5-201ENST00000518796 181 ntBASIC23.29■■□□□ 1.32
MT-CO3P00414 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
MT-CO3P00414 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
MT-CO3P00414 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
MT-CO3P00414 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.28■■□□□ 1.32
MT-CO3P00414 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.28■■□□□ 1.32
MT-CO3P00414 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
MT-CO3P00414 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
MT-CO3P00414 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
MT-CO3P00414 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.27■■□□□ 1.32
MT-CO3P00414 KRT18P10-201ENST00000388836 1287 ntBASIC23.27■■□□□ 1.32
MT-CO3P00414 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
MT-CO3P00414 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
MT-CO3P00414 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
MT-CO3P00414 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
MT-CO3P00414 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC23.26■■□□□ 1.31
MT-CO3P00414 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC23.26■■□□□ 1.31
MT-CO3P00414 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
MT-CO3P00414 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC23.26■■□□□ 1.31
MT-CO3P00414 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
MT-CO3P00414 ST7-205ENST00000393446 2114 ntTSL 5 BASIC23.25■■□□□ 1.31
MT-CO3P00414 MIR935-201ENST00000401179 91 ntBASIC23.25■■□□□ 1.31
MT-CO3P00414 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.25■■□□□ 1.31
MT-CO3P00414 PEMT-206ENST00000435340 960 ntTSL 5 BASIC23.25■■□□□ 1.31
MT-CO3P00414 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.25■■□□□ 1.31
MT-CO3P00414 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
MT-CO3P00414 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
MT-CO3P00414 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
MT-CO3P00414 PROC-203ENST00000409048 1586 ntTSL 5 BASIC23.24■■□□□ 1.31
MT-CO3P00414 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
MT-CO3P00414 UNC93B8-201ENST00000511903 705 ntBASIC23.24■■□□□ 1.31
MT-CO3P00414 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.24■■□□□ 1.31
MT-CO3P00414 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
MT-CO3P00414 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC23.23■■□□□ 1.31
MT-CO3P00414 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
MT-CO3P00414 KRT16P3-201ENST00000439127 1283 ntBASIC23.23■■□□□ 1.31
MT-CO3P00414 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.23■■□□□ 1.31
MT-CO3P00414 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
MT-CO3P00414 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
MT-CO3P00414 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
MT-CO3P00414 KRT18P24-201ENST00000344739 1156 ntBASIC23.22■■□□□ 1.31
MT-CO3P00414 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
MT-CO3P00414 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
MT-CO3P00414 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC23.22■■□□□ 1.31
MT-CO3P00414 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.22■■□□□ 1.31
MT-CO3P00414 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.22■■□□□ 1.31
MT-CO3P00414 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
MT-CO3P00414 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC23.21■■□□□ 1.31
MT-CO3P00414 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC23.21■■□□□ 1.31
MT-CO3P00414 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
MT-CO3P00414 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC23.2■■□□□ 1.3
MT-CO3P00414 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
MT-CO3P00414 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
MT-CO3P00414 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
MT-CO3P00414 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
MT-CO3P00414 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC23.2■■□□□ 1.3
MT-CO3P00414 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
MT-CO3P00414 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.2■■□□□ 1.3
MT-CO3P00414 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
MT-CO3P00414 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
MT-CO3P00414 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
MT-CO3P00414 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC23.19■■□□□ 1.3
MT-CO3P00414 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
MT-CO3P00414 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC23.19■■□□□ 1.3
MT-CO3P00414 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC23.19■■□□□ 1.3
MT-CO3P00414 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
MT-CO3P00414 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
MT-CO3P00414 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
MT-CO3P00414 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC23.18■■□□□ 1.3
MT-CO3P00414 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
MT-CO3P00414 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.17■■□□□ 1.3
MT-CO3P00414 ST7-202ENST00000323984 2142 ntTSL 5 BASIC23.16■■□□□ 1.3
MT-CO3P00414 ST7-207ENST00000393449 2127 ntTSL 5 BASIC23.16■■□□□ 1.3
MT-CO3P00414 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC23.16■■□□□ 1.3
MT-CO3P00414 AC137630.3-201ENST00000607245 391 ntBASIC23.16■■□□□ 1.3
MT-CO3P00414 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC23.16■■□□□ 1.3
MT-CO3P00414 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
MT-CO3P00414 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC23.16■■□□□ 1.3
MT-CO3P00414 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
MT-CO3P00414 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC23.15■■□□□ 1.3
MT-CO3P00414 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
MT-CO3P00414 TSPY9P-201ENST00000440215 945 ntBASIC23.15■■□□□ 1.3
MT-CO3P00414 TSPY11P-201ENST00000442607 1045 ntBASIC23.15■■□□□ 1.3
MT-CO3P00414 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.15■■□□□ 1.3
MT-CO3P00414 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
MT-CO3P00414 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
MT-CO3P00414 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
MT-CO3P00414 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC23.13■■□□□ 1.29
MT-CO3P00414 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
MT-CO3P00414 ABCB10P1-201ENST00000614297 2181 ntBASIC23.13■■□□□ 1.29
MT-CO3P00414 AC120024.1-201ENST00000562672 995 ntBASIC23.12■■□□□ 1.29
MT-CO3P00414 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.12■■□□□ 1.29
MT-CO3P00414 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC23.12■■□□□ 1.29
MT-CO3P00414 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms