Protein–RNA interactions for Protein: O60906

SMPD2, Sphingomyelin phosphodiesterase 2, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD2O60906 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMPD2O60906 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.16■□□□□ 0.98
SMPD2O60906 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
SMPD2O60906 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SMPD2O60906 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC21.16■□□□□ 0.98
SMPD2O60906 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SMPD2O60906 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.15■□□□□ 0.98
SMPD2O60906 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMPD2O60906 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SMPD2O60906 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMPD2O60906 YBX1P4-201ENST00000392794 808 ntBASIC21.15■□□□□ 0.98
SMPD2O60906 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.15■□□□□ 0.98
SMPD2O60906 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.15■□□□□ 0.98
SMPD2O60906 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.15■□□□□ 0.98
SMPD2O60906 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMPD2O60906 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.14■□□□□ 0.98
SMPD2O60906 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SMPD2O60906 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SMPD2O60906 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SMPD2O60906 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SMPD2O60906 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.14■□□□□ 0.97
SMPD2O60906 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
SMPD2O60906 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SMPD2O60906 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
SMPD2O60906 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.13■□□□□ 0.97
SMPD2O60906 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21.13■□□□□ 0.97
SMPD2O60906 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
SMPD2O60906 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.13■□□□□ 0.97
SMPD2O60906 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.13■□□□□ 0.97
SMPD2O60906 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.13■□□□□ 0.97
SMPD2O60906 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SMPD2O60906 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
SMPD2O60906 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.12■□□□□ 0.97
SMPD2O60906 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMPD2O60906 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMPD2O60906 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMPD2O60906 MIR6765-201ENST00000614092 87 ntBASIC21.12■□□□□ 0.97
SMPD2O60906 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
SMPD2O60906 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SMPD2O60906 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.12■□□□□ 0.97
SMPD2O60906 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMPD2O60906 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SMPD2O60906 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
SMPD2O60906 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SMPD2O60906 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.11■□□□□ 0.97
SMPD2O60906 MIR3960-201ENST00000583311 91 ntBASIC21.11■□□□□ 0.97
SMPD2O60906 RAP2CP1-202ENST00000605179 643 ntBASIC21.11■□□□□ 0.97
SMPD2O60906 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SMPD2O60906 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.11■□□□□ 0.97
SMPD2O60906 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
SMPD2O60906 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
SMPD2O60906 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SMPD2O60906 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SMPD2O60906 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.1■□□□□ 0.97
SMPD2O60906 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.1■□□□□ 0.97
SMPD2O60906 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.1■□□□□ 0.97
SMPD2O60906 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SMPD2O60906 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
SMPD2O60906 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SMPD2O60906 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.1■□□□□ 0.97
SMPD2O60906 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
SMPD2O60906 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
SMPD2O60906 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SMPD2O60906 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SMPD2O60906 AC018755.3-202ENST00000596210 929 ntBASIC21.09■□□□□ 0.97
SMPD2O60906 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.09■□□□□ 0.97
SMPD2O60906 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SMPD2O60906 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SMPD2O60906 AC009299.2-201ENST00000482477 511 ntBASIC21.08■□□□□ 0.97
SMPD2O60906 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SMPD2O60906 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
SMPD2O60906 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.07■□□□□ 0.96
SMPD2O60906 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SMPD2O60906 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SMPD2O60906 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMPD2O60906 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMPD2O60906 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
SMPD2O60906 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.07■□□□□ 0.96
SMPD2O60906 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SMPD2O60906 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SMPD2O60906 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SMPD2O60906 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMPD2O60906 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMPD2O60906 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SMPD2O60906 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMPD2O60906 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.06■□□□□ 0.96
SMPD2O60906 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMPD2O60906 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SMPD2O60906 AL592295.1-201ENST00000400984 884 ntBASIC21.06■□□□□ 0.96
SMPD2O60906 SPCS2P3-201ENST00000500401 656 ntBASIC21.06■□□□□ 0.96
SMPD2O60906 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SMPD2O60906 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.06■□□□□ 0.96
SMPD2O60906 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
SMPD2O60906 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.05■□□□□ 0.96
SMPD2O60906 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.05■□□□□ 0.96
SMPD2O60906 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SMPD2O60906 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.05■□□□□ 0.96
SMPD2O60906 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.05■□□□□ 0.96
SMPD2O60906 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.05■□□□□ 0.96
SMPD2O60906 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms