Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC31.48■■■□□ 2.63
KCNQ3O43525 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC31.48■■■□□ 2.63
KCNQ3O43525 HYI-210ENST00000486909 905 ntTSL 5 BASIC31.48■■■□□ 2.63
KCNQ3O43525 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC31.48■■■□□ 2.63
KCNQ3O43525 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
KCNQ3O43525 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC31.47■■■□□ 2.63
KCNQ3O43525 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC31.47■■■□□ 2.63
KCNQ3O43525 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC31.47■■■□□ 2.63
KCNQ3O43525 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC31.46■■■□□ 2.63
KCNQ3O43525 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
KCNQ3O43525 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
KCNQ3O43525 AC087393.1-201ENST00000582896 145 ntBASIC31.46■■■□□ 2.63
KCNQ3O43525 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
KCNQ3O43525 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC31.45■■■□□ 2.63
KCNQ3O43525 AC142472.1-201ENST00000612013 1741 ntBASIC31.45■■■□□ 2.63
KCNQ3O43525 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
KCNQ3O43525 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
KCNQ3O43525 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
KCNQ3O43525 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
KCNQ3O43525 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC31.44■■■□□ 2.62
KCNQ3O43525 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
KCNQ3O43525 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC31.44■■■□□ 2.62
KCNQ3O43525 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC31.43■■■□□ 2.62
KCNQ3O43525 MIR4508-201ENST00000584178 70 ntBASIC31.43■■■□□ 2.62
KCNQ3O43525 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC31.43■■■□□ 2.62
KCNQ3O43525 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC31.43■■■□□ 2.62
KCNQ3O43525 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC31.42■■■□□ 2.62
KCNQ3O43525 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
KCNQ3O43525 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
KCNQ3O43525 RPS2P7-201ENST00000447334 885 ntBASIC31.42■■■□□ 2.62
KCNQ3O43525 AC009299.2-201ENST00000482477 511 ntBASIC31.42■■■□□ 2.62
KCNQ3O43525 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC31.42■■■□□ 2.62
KCNQ3O43525 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC31.42■■■□□ 2.62
KCNQ3O43525 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
KCNQ3O43525 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC31.42■■■□□ 2.62
KCNQ3O43525 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
KCNQ3O43525 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
KCNQ3O43525 YBX1P4-201ENST00000392794 808 ntBASIC31.41■■■□□ 2.62
KCNQ3O43525 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC31.41■■■□□ 2.62
KCNQ3O43525 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC31.41■■■□□ 2.62
KCNQ3O43525 AP004609.3-201ENST00000610705 1884 ntBASIC31.41■■■□□ 2.62
KCNQ3O43525 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
KCNQ3O43525 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
KCNQ3O43525 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
KCNQ3O43525 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC31.4■■■□□ 2.62
KCNQ3O43525 AC103724.3-201ENST00000564481 992 ntBASIC31.4■■■□□ 2.62
KCNQ3O43525 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
KCNQ3O43525 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
KCNQ3O43525 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
KCNQ3O43525 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
KCNQ3O43525 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC31.39■■■□□ 2.62
KCNQ3O43525 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
KCNQ3O43525 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC31.39■■■□□ 2.61
KCNQ3O43525 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
KCNQ3O43525 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC31.38■■■□□ 2.61
KCNQ3O43525 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
KCNQ3O43525 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
KCNQ3O43525 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
KCNQ3O43525 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC31.37■■■□□ 2.61
KCNQ3O43525 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
KCNQ3O43525 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
KCNQ3O43525 MTX2-204ENST00000443241 799 ntTSL 3 BASIC31.37■■■□□ 2.61
KCNQ3O43525 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
KCNQ3O43525 LONRF2P2-201ENST00000439212 571 ntBASIC31.36■■■□□ 2.61
KCNQ3O43525 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
KCNQ3O43525 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC31.36■■■□□ 2.61
KCNQ3O43525 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
KCNQ3O43525 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
KCNQ3O43525 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC31.35■■■□□ 2.61
KCNQ3O43525 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
KCNQ3O43525 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
KCNQ3O43525 TRIR-205ENST00000592273 783 ntTSL 3 BASIC31.34■■■□□ 2.61
KCNQ3O43525 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
KCNQ3O43525 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
KCNQ3O43525 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC31.33■■■□□ 2.61
KCNQ3O43525 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC31.33■■■□□ 2.61
KCNQ3O43525 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
KCNQ3O43525 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.61
KCNQ3O43525 SHF-208ENST00000560734 1731 ntTSL 3 BASIC31.32■■■□□ 2.61
KCNQ3O43525 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
KCNQ3O43525 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC31.32■■■□□ 2.6
KCNQ3O43525 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC31.31■■■□□ 2.6
KCNQ3O43525 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
KCNQ3O43525 AC019171.1-201ENST00000601251 1056 ntBASIC31.31■■■□□ 2.6
KCNQ3O43525 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
KCNQ3O43525 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC31.3■■■□□ 2.6
KCNQ3O43525 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
KCNQ3O43525 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC31.3■■■□□ 2.6
KCNQ3O43525 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
KCNQ3O43525 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC31.29■■■□□ 2.6
KCNQ3O43525 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
KCNQ3O43525 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC31.28■■■□□ 2.6
KCNQ3O43525 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC31.28■■■□□ 2.6
KCNQ3O43525 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
KCNQ3O43525 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
KCNQ3O43525 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC31.28■■■□□ 2.6
KCNQ3O43525 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC31.28■■■□□ 2.6
KCNQ3O43525 PRTG-204ENST00000561292 833 ntTSL 3 BASIC31.28■■■□□ 2.6
KCNQ3O43525 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
KCNQ3O43525 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC31.27■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms