Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NDUFS4O43181 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
NDUFS4O43181 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC23.18■■□□□ 1.3
NDUFS4O43181 AC145676.1-201ENST00000514988 2004 ntBASIC23.18■■□□□ 1.3
NDUFS4O43181 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC23.18■■□□□ 1.3
NDUFS4O43181 GFER-205ENST00000569451 517 ntTSL 5 BASIC23.18■■□□□ 1.3
NDUFS4O43181 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.18■■□□□ 1.3
NDUFS4O43181 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NDUFS4O43181 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NDUFS4O43181 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NDUFS4O43181 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.17■■□□□ 1.3
NDUFS4O43181 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
NDUFS4O43181 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.17■■□□□ 1.3
NDUFS4O43181 ABHD17AP5-201ENST00000580133 923 ntBASIC23.17■■□□□ 1.3
NDUFS4O43181 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
NDUFS4O43181 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
NDUFS4O43181 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NDUFS4O43181 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC23.16■■□□□ 1.3
NDUFS4O43181 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC23.16■■□□□ 1.3
NDUFS4O43181 AC026202.3-201ENST00000600805 1127 ntBASIC23.16■■□□□ 1.3
NDUFS4O43181 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.16■■□□□ 1.3
NDUFS4O43181 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.16■■□□□ 1.3
NDUFS4O43181 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NDUFS4O43181 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NDUFS4O43181 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
NDUFS4O43181 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
NDUFS4O43181 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
NDUFS4O43181 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NDUFS4O43181 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NDUFS4O43181 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NDUFS4O43181 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
NDUFS4O43181 AC009831.1-201ENST00000580420 1582 ntBASIC23.14■■□□□ 1.3
NDUFS4O43181 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC23.14■■□□□ 1.29
NDUFS4O43181 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
NDUFS4O43181 AC133552.2-201ENST00000619106 1032 ntBASIC23.14■■□□□ 1.29
NDUFS4O43181 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
NDUFS4O43181 DUSP8P4-201ENST00000399538 1761 ntBASIC23.14■■□□□ 1.29
NDUFS4O43181 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.13■■□□□ 1.29
NDUFS4O43181 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC23.13■■□□□ 1.29
NDUFS4O43181 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
NDUFS4O43181 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
NDUFS4O43181 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
NDUFS4O43181 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
NDUFS4O43181 HES4-204ENST00000484667 667 ntTSL 3 BASIC23.13■■□□□ 1.29
NDUFS4O43181 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC23.13■■□□□ 1.29
NDUFS4O43181 RAP2CP1-202ENST00000605179 643 ntBASIC23.13■■□□□ 1.29
NDUFS4O43181 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.13■■□□□ 1.29
NDUFS4O43181 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
NDUFS4O43181 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
NDUFS4O43181 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
NDUFS4O43181 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
NDUFS4O43181 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NDUFS4O43181 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NDUFS4O43181 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NDUFS4O43181 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
NDUFS4O43181 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.11■■□□□ 1.29
NDUFS4O43181 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
NDUFS4O43181 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NDUFS4O43181 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NDUFS4O43181 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
NDUFS4O43181 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
NDUFS4O43181 ERN1-208ENST00000606895 2068 ntBASIC23.11■■□□□ 1.29
NDUFS4O43181 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NDUFS4O43181 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
NDUFS4O43181 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NDUFS4O43181 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.1■■□□□ 1.29
NDUFS4O43181 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.09■■□□□ 1.29
NDUFS4O43181 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
NDUFS4O43181 U85056.1-201ENST00000616429 682 ntBASIC23.09■■□□□ 1.29
NDUFS4O43181 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NDUFS4O43181 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NDUFS4O43181 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
NDUFS4O43181 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
NDUFS4O43181 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
NDUFS4O43181 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC23.08■■□□□ 1.29
NDUFS4O43181 AC010501.1-201ENST00000606270 1962 ntBASIC23.08■■□□□ 1.29
NDUFS4O43181 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.07■■□□□ 1.28
NDUFS4O43181 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.07■■□□□ 1.28
NDUFS4O43181 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
NDUFS4O43181 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
NDUFS4O43181 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.07■■□□□ 1.28
NDUFS4O43181 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.07■■□□□ 1.28
NDUFS4O43181 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
NDUFS4O43181 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
NDUFS4O43181 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
NDUFS4O43181 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
NDUFS4O43181 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC23.06■■□□□ 1.28
NDUFS4O43181 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
NDUFS4O43181 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC23.06■■□□□ 1.28
NDUFS4O43181 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.05■■□□□ 1.28
NDUFS4O43181 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
NDUFS4O43181 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
NDUFS4O43181 AL592293.1-201ENST00000502889 1188 ntBASIC23.05■■□□□ 1.28
NDUFS4O43181 NTF6A-201ENST00000591175 560 ntBASIC23.05■■□□□ 1.28
NDUFS4O43181 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC23.05■■□□□ 1.28
NDUFS4O43181 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.05■■□□□ 1.28
NDUFS4O43181 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.05■■□□□ 1.28
NDUFS4O43181 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
NDUFS4O43181 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
NDUFS4O43181 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms