Protein–RNA interactions for Protein: O14966

RAB29, Ras-related protein Rab-7L1, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB29O14966 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB29O14966 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB29O14966 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB29O14966 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB29O14966 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB29O14966 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RAB29O14966 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC19.84■□□□□ 0.77
RAB29O14966 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB29O14966 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RAB29O14966 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
RAB29O14966 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB29O14966 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RAB29O14966 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RAB29O14966 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RAB29O14966 PVT1-219ENST00000523427 938 ntTSL 3 BASIC19.83■□□□□ 0.77
RAB29O14966 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RAB29O14966 SNAI3-AS1-204ENST00000567997 2048 ntBASIC19.83■□□□□ 0.76
RAB29O14966 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RAB29O14966 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RAB29O14966 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RAB29O14966 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RAB29O14966 MIR639-201ENST00000384974 98 ntBASIC19.82■□□□□ 0.76
RAB29O14966 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RAB29O14966 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAB29O14966 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RAB29O14966 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RAB29O14966 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RAB29O14966 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAB29O14966 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAB29O14966 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAB29O14966 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAB29O14966 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAB29O14966 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RAB29O14966 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAB29O14966 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
RAB29O14966 ERN1-208ENST00000606895 2068 ntBASIC19.81■□□□□ 0.76
RAB29O14966 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RAB29O14966 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.81■□□□□ 0.76
RAB29O14966 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
RAB29O14966 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAB29O14966 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAB29O14966 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
RAB29O14966 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RAB29O14966 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC19.8■□□□□ 0.76
RAB29O14966 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC19.8■□□□□ 0.76
RAB29O14966 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
RAB29O14966 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.8■□□□□ 0.76
RAB29O14966 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAB29O14966 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RAB29O14966 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAB29O14966 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
RAB29O14966 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RAB29O14966 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAB29O14966 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAB29O14966 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RAB29O14966 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RAB29O14966 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC19.78■□□□□ 0.76
RAB29O14966 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAB29O14966 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC19.77■□□□□ 0.76
RAB29O14966 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RAB29O14966 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.77■□□□□ 0.76
RAB29O14966 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
RAB29O14966 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAB29O14966 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
RAB29O14966 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.76■□□□□ 0.75
RAB29O14966 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.76■□□□□ 0.75
RAB29O14966 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC19.76■□□□□ 0.75
RAB29O14966 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.76■□□□□ 0.75
RAB29O14966 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC19.76■□□□□ 0.75
RAB29O14966 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAB29O14966 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAB29O14966 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
RAB29O14966 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RAB29O14966 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAB29O14966 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAB29O14966 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAB29O14966 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.74■□□□□ 0.75
RAB29O14966 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.74■□□□□ 0.75
RAB29O14966 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAB29O14966 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RAB29O14966 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RAB29O14966 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB29O14966 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.73■□□□□ 0.75
RAB29O14966 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
RAB29O14966 AC060814.1-201ENST00000554326 538 ntBASIC19.73■□□□□ 0.75
RAB29O14966 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RAB29O14966 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.72■□□□□ 0.75
RAB29O14966 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB29O14966 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB29O14966 RPS2-202ENST00000526522 924 ntTSL 2 BASIC19.72■□□□□ 0.75
RAB29O14966 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
RAB29O14966 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RAB29O14966 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.72■□□□□ 0.75
RAB29O14966 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.71■□□□□ 0.75
RAB29O14966 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
RAB29O14966 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB29O14966 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB29O14966 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB29O14966 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB29O14966 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms