Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AC010980.1-201ENST00000587192 1142 ntBASIC22.02■■□□□ 1.12
NPIPA2E9PIF3 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
NPIPA2E9PIF3 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
NPIPA2E9PIF3 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC22.01■■□□□ 1.11
NPIPA2E9PIF3 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
NPIPA2E9PIF3 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC22.01■■□□□ 1.11
NPIPA2E9PIF3 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
NPIPA2E9PIF3 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC22.01■■□□□ 1.11
NPIPA2E9PIF3 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC22.01■■□□□ 1.11
NPIPA2E9PIF3 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
NPIPA2E9PIF3 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
NPIPA2E9PIF3 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC22■■□□□ 1.11
NPIPA2E9PIF3 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
NPIPA2E9PIF3 AP004609.3-201ENST00000610705 1884 ntBASIC22■■□□□ 1.11
NPIPA2E9PIF3 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
NPIPA2E9PIF3 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
NPIPA2E9PIF3 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.99■■□□□ 1.11
NPIPA2E9PIF3 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
NPIPA2E9PIF3 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
NPIPA2E9PIF3 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.99■■□□□ 1.11
NPIPA2E9PIF3 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.99■■□□□ 1.11
NPIPA2E9PIF3 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.99■■□□□ 1.11
NPIPA2E9PIF3 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
NPIPA2E9PIF3 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
NPIPA2E9PIF3 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
NPIPA2E9PIF3 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.98■■□□□ 1.11
NPIPA2E9PIF3 AC074183.2-201ENST00000623112 922 ntBASIC21.98■■□□□ 1.11
NPIPA2E9PIF3 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
NPIPA2E9PIF3 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.97■■□□□ 1.11
NPIPA2E9PIF3 KRT8P33-201ENST00000508125 1423 ntBASIC21.97■■□□□ 1.11
NPIPA2E9PIF3 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NPIPA2E9PIF3 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NPIPA2E9PIF3 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NPIPA2E9PIF3 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
NPIPA2E9PIF3 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.96■■□□□ 1.11
NPIPA2E9PIF3 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
NPIPA2E9PIF3 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.96■■□□□ 1.11
NPIPA2E9PIF3 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.95■■□□□ 1.11
NPIPA2E9PIF3 AC142472.1-201ENST00000612013 1741 ntBASIC21.95■■□□□ 1.1
NPIPA2E9PIF3 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.95■■□□□ 1.1
NPIPA2E9PIF3 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.95■■□□□ 1.1
NPIPA2E9PIF3 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.95■■□□□ 1.1
NPIPA2E9PIF3 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.95■■□□□ 1.1
NPIPA2E9PIF3 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
NPIPA2E9PIF3 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NPIPA2E9PIF3 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NPIPA2E9PIF3 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC21.94■■□□□ 1.1
NPIPA2E9PIF3 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NPIPA2E9PIF3 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.94■■□□□ 1.1
NPIPA2E9PIF3 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.94■■□□□ 1.1
NPIPA2E9PIF3 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.94■■□□□ 1.1
NPIPA2E9PIF3 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NPIPA2E9PIF3 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.94■■□□□ 1.1
NPIPA2E9PIF3 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NPIPA2E9PIF3 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
NPIPA2E9PIF3 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NPIPA2E9PIF3 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.93■■□□□ 1.1
NPIPA2E9PIF3 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.93■■□□□ 1.1
NPIPA2E9PIF3 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NPIPA2E9PIF3 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
NPIPA2E9PIF3 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.92■■□□□ 1.1
NPIPA2E9PIF3 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
NPIPA2E9PIF3 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
NPIPA2E9PIF3 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NPIPA2E9PIF3 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NPIPA2E9PIF3 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NPIPA2E9PIF3 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
NPIPA2E9PIF3 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
NPIPA2E9PIF3 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.91■■□□□ 1.1
NPIPA2E9PIF3 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NPIPA2E9PIF3 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.91■■□□□ 1.1
NPIPA2E9PIF3 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NPIPA2E9PIF3 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
NPIPA2E9PIF3 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.9■■□□□ 1.1
NPIPA2E9PIF3 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
NPIPA2E9PIF3 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NPIPA2E9PIF3 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
NPIPA2E9PIF3 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NPIPA2E9PIF3 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
NPIPA2E9PIF3 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
NPIPA2E9PIF3 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
NPIPA2E9PIF3 YBX1P4-201ENST00000392794 808 ntBASIC21.89■■□□□ 1.09
NPIPA2E9PIF3 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.89■■□□□ 1.09
NPIPA2E9PIF3 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
NPIPA2E9PIF3 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.89■■□□□ 1.09
NPIPA2E9PIF3 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NPIPA2E9PIF3 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
NPIPA2E9PIF3 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
NPIPA2E9PIF3 AL451085.2-201ENST00000605085 799 ntBASIC21.88■■□□□ 1.09
NPIPA2E9PIF3 PVT1_1.1-201ENST00000615125 194 ntBASIC21.88■■□□□ 1.09
NPIPA2E9PIF3 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NPIPA2E9PIF3 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
NPIPA2E9PIF3 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
NPIPA2E9PIF3 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NPIPA2E9PIF3 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.87■■□□□ 1.09
NPIPA2E9PIF3 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
NPIPA2E9PIF3 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NPIPA2E9PIF3 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
NPIPA2E9PIF3 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.86■■□□□ 1.09
NPIPA2E9PIF3 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms