Protein–RNA interactions for Protein: A6NE21

FAM90A18P, Putative protein FAM90A18P/FAM90A19P, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A18PA6NE21 AC016575.1-201ENST00000607026 382 ntBASIC20.38■□□□□ 0.85
FAM90A18PA6NE21 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.38■□□□□ 0.85
FAM90A18PA6NE21 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
FAM90A18PA6NE21 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.38■□□□□ 0.85
FAM90A18PA6NE21 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
FAM90A18PA6NE21 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
FAM90A18PA6NE21 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
FAM90A18PA6NE21 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
FAM90A18PA6NE21 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.37■□□□□ 0.85
FAM90A18PA6NE21 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
FAM90A18PA6NE21 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.37■□□□□ 0.85
FAM90A18PA6NE21 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.37■□□□□ 0.85
FAM90A18PA6NE21 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
FAM90A18PA6NE21 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
FAM90A18PA6NE21 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
FAM90A18PA6NE21 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
FAM90A18PA6NE21 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
FAM90A18PA6NE21 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
FAM90A18PA6NE21 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
FAM90A18PA6NE21 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
FAM90A18PA6NE21 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
FAM90A18PA6NE21 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.35■□□□□ 0.85
FAM90A18PA6NE21 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
FAM90A18PA6NE21 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
FAM90A18PA6NE21 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
FAM90A18PA6NE21 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
FAM90A18PA6NE21 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
FAM90A18PA6NE21 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
FAM90A18PA6NE21 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
FAM90A18PA6NE21 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
FAM90A18PA6NE21 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
FAM90A18PA6NE21 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
FAM90A18PA6NE21 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
FAM90A18PA6NE21 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
FAM90A18PA6NE21 MIR639-201ENST00000384974 98 ntBASIC20.33■□□□□ 0.85
FAM90A18PA6NE21 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.33■□□□□ 0.85
FAM90A18PA6NE21 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
FAM90A18PA6NE21 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
FAM90A18PA6NE21 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
FAM90A18PA6NE21 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.33■□□□□ 0.84
FAM90A18PA6NE21 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FAM90A18PA6NE21 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
FAM90A18PA6NE21 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FAM90A18PA6NE21 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FAM90A18PA6NE21 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
FAM90A18PA6NE21 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
FAM90A18PA6NE21 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
FAM90A18PA6NE21 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
FAM90A18PA6NE21 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FAM90A18PA6NE21 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.31■□□□□ 0.84
FAM90A18PA6NE21 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
FAM90A18PA6NE21 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FAM90A18PA6NE21 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
FAM90A18PA6NE21 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FAM90A18PA6NE21 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.3■□□□□ 0.84
FAM90A18PA6NE21 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
FAM90A18PA6NE21 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FAM90A18PA6NE21 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FAM90A18PA6NE21 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FAM90A18PA6NE21 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
FAM90A18PA6NE21 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
FAM90A18PA6NE21 AC022211.4-201ENST00000625094 2161 ntBASIC20.29■□□□□ 0.84
FAM90A18PA6NE21 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FAM90A18PA6NE21 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FAM90A18PA6NE21 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FAM90A18PA6NE21 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.29■□□□□ 0.84
FAM90A18PA6NE21 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.29■□□□□ 0.84
FAM90A18PA6NE21 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.29■□□□□ 0.84
FAM90A18PA6NE21 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FAM90A18PA6NE21 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FAM90A18PA6NE21 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FAM90A18PA6NE21 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
FAM90A18PA6NE21 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FAM90A18PA6NE21 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.28■□□□□ 0.84
FAM90A18PA6NE21 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
FAM90A18PA6NE21 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.28■□□□□ 0.84
FAM90A18PA6NE21 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
FAM90A18PA6NE21 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.27■□□□□ 0.84
FAM90A18PA6NE21 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
FAM90A18PA6NE21 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
FAM90A18PA6NE21 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.27■□□□□ 0.84
FAM90A18PA6NE21 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.27■□□□□ 0.84
FAM90A18PA6NE21 AC093323.1-202ENST00000635031 2045 ntBASIC20.27■□□□□ 0.84
FAM90A18PA6NE21 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
FAM90A18PA6NE21 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.26■□□□□ 0.83
FAM90A18PA6NE21 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FAM90A18PA6NE21 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
FAM90A18PA6NE21 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
FAM90A18PA6NE21 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
FAM90A18PA6NE21 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
FAM90A18PA6NE21 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
FAM90A18PA6NE21 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
FAM90A18PA6NE21 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
FAM90A18PA6NE21 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
FAM90A18PA6NE21 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
FAM90A18PA6NE21 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
FAM90A18PA6NE21 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
FAM90A18PA6NE21 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
FAM90A18PA6NE21 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
FAM90A18PA6NE21 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms