Protein–RNA interactions for Protein: A0A1B0GVV1

SMIM35, Small integral membrane protein 35, humanhuman

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM35A0A1B0GVV1 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
SMIM35A0A1B0GVV1 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
SMIM35A0A1B0GVV1 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
SMIM35A0A1B0GVV1 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
SMIM35A0A1B0GVV1 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
SMIM35A0A1B0GVV1 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
SMIM35A0A1B0GVV1 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC26.79■■□□□ 1.88
SMIM35A0A1B0GVV1 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC26.79■■□□□ 1.88
SMIM35A0A1B0GVV1 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
SMIM35A0A1B0GVV1 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
SMIM35A0A1B0GVV1 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC26.79■■□□□ 1.88
SMIM35A0A1B0GVV1 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
SMIM35A0A1B0GVV1 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC26.77■■□□□ 1.88
SMIM35A0A1B0GVV1 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
SMIM35A0A1B0GVV1 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC26.77■■□□□ 1.88
SMIM35A0A1B0GVV1 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
SMIM35A0A1B0GVV1 SHF-208ENST00000560734 1731 ntTSL 3 BASIC26.76■■□□□ 1.88
SMIM35A0A1B0GVV1 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC26.76■■□□□ 1.87
SMIM35A0A1B0GVV1 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC26.75■■□□□ 1.87
SMIM35A0A1B0GVV1 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC26.75■■□□□ 1.87
SMIM35A0A1B0GVV1 KRT18P10-201ENST00000388836 1287 ntBASIC26.75■■□□□ 1.87
SMIM35A0A1B0GVV1 LONRF2P2-201ENST00000439212 571 ntBASIC26.75■■□□□ 1.87
SMIM35A0A1B0GVV1 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
SMIM35A0A1B0GVV1 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
SMIM35A0A1B0GVV1 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC26.75■■□□□ 1.87
SMIM35A0A1B0GVV1 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC26.75■■□□□ 1.87
SMIM35A0A1B0GVV1 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC26.74■■□□□ 1.87
SMIM35A0A1B0GVV1 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
SMIM35A0A1B0GVV1 TRIR-205ENST00000592273 783 ntTSL 3 BASIC26.74■■□□□ 1.87
SMIM35A0A1B0GVV1 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC26.74■■□□□ 1.87
SMIM35A0A1B0GVV1 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC26.74■■□□□ 1.87
SMIM35A0A1B0GVV1 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
SMIM35A0A1B0GVV1 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC26.74■■□□□ 1.87
SMIM35A0A1B0GVV1 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SMIM35A0A1B0GVV1 AP004609.3-201ENST00000610705 1884 ntBASIC26.73■■□□□ 1.87
SMIM35A0A1B0GVV1 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
SMIM35A0A1B0GVV1 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
SMIM35A0A1B0GVV1 AC009299.2-201ENST00000482477 511 ntBASIC26.73■■□□□ 1.87
SMIM35A0A1B0GVV1 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
SMIM35A0A1B0GVV1 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SMIM35A0A1B0GVV1 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
SMIM35A0A1B0GVV1 AC103724.3-201ENST00000564481 992 ntBASIC26.72■■□□□ 1.87
SMIM35A0A1B0GVV1 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC26.72■■□□□ 1.87
SMIM35A0A1B0GVV1 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SMIM35A0A1B0GVV1 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC26.71■■□□□ 1.87
SMIM35A0A1B0GVV1 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC26.71■■□□□ 1.87
SMIM35A0A1B0GVV1 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SMIM35A0A1B0GVV1 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC26.71■■□□□ 1.87
SMIM35A0A1B0GVV1 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SMIM35A0A1B0GVV1 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
SMIM35A0A1B0GVV1 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
SMIM35A0A1B0GVV1 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
SMIM35A0A1B0GVV1 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
SMIM35A0A1B0GVV1 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC26.7■■□□□ 1.86
SMIM35A0A1B0GVV1 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
SMIM35A0A1B0GVV1 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
SMIM35A0A1B0GVV1 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC26.69■■□□□ 1.86
SMIM35A0A1B0GVV1 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC26.69■■□□□ 1.86
SMIM35A0A1B0GVV1 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
SMIM35A0A1B0GVV1 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC26.69■■□□□ 1.86
SMIM35A0A1B0GVV1 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
SMIM35A0A1B0GVV1 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
SMIM35A0A1B0GVV1 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.68■■□□□ 1.86
SMIM35A0A1B0GVV1 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
SMIM35A0A1B0GVV1 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
SMIM35A0A1B0GVV1 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
SMIM35A0A1B0GVV1 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC26.67■■□□□ 1.86
SMIM35A0A1B0GVV1 AL031848.2-201ENST00000607670 837 ntBASIC26.67■■□□□ 1.86
SMIM35A0A1B0GVV1 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
SMIM35A0A1B0GVV1 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC26.67■■□□□ 1.86
SMIM35A0A1B0GVV1 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
SMIM35A0A1B0GVV1 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC26.66■■□□□ 1.86
SMIM35A0A1B0GVV1 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
SMIM35A0A1B0GVV1 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC26.66■■□□□ 1.86
SMIM35A0A1B0GVV1 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SMIM35A0A1B0GVV1 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
SMIM35A0A1B0GVV1 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC26.65■■□□□ 1.86
SMIM35A0A1B0GVV1 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC26.65■■□□□ 1.86
SMIM35A0A1B0GVV1 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC26.65■■□□□ 1.86
SMIM35A0A1B0GVV1 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
SMIM35A0A1B0GVV1 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
SMIM35A0A1B0GVV1 PRTG-204ENST00000561292 833 ntTSL 3 BASIC26.64■■□□□ 1.86
SMIM35A0A1B0GVV1 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC26.63■■□□□ 1.85
SMIM35A0A1B0GVV1 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
SMIM35A0A1B0GVV1 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
SMIM35A0A1B0GVV1 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.63■■□□□ 1.85
SMIM35A0A1B0GVV1 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
SMIM35A0A1B0GVV1 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC26.62■■□□□ 1.85
SMIM35A0A1B0GVV1 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
SMIM35A0A1B0GVV1 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
SMIM35A0A1B0GVV1 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC26.62■■□□□ 1.85
SMIM35A0A1B0GVV1 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SMIM35A0A1B0GVV1 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
SMIM35A0A1B0GVV1 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SMIM35A0A1B0GVV1 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC26.61■■□□□ 1.85
SMIM35A0A1B0GVV1 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SMIM35A0A1B0GVV1 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SMIM35A0A1B0GVV1 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SMIM35A0A1B0GVV1 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SMIM35A0A1B0GVV1 HES6-204ENST00000409182 863 ntTSL 2 BASIC26.6■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms